5XK6
Structure of a prenyltransferase soaked with IPP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016094 | biological_process | polyprenol biosynthetic process |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| A | 0045547 | molecular_function | ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0016094 | biological_process | polyprenol biosynthetic process |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| B | 0045547 | molecular_function | ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0016094 | biological_process | polyprenol biosynthetic process |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| C | 0045547 | molecular_function | ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0016094 | biological_process | polyprenol biosynthetic process |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| D | 0045547 | molecular_function | ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 500 |
| Chain | Residue |
| A | ASP9 |
| A | POP501 |
| A | SO4502 |
| A | HOH606 |
| A | HOH621 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue POP A 501 |
| Chain | Residue |
| A | ARG13 |
| A | TYR26 |
| A | ARG60 |
| A | MG500 |
| A | HOH606 |
| A | HOH609 |
| A | ASP9 |
| A | GLY10 |
| A | MET11 |
| A | ARG12 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue SO4 A 502 |
| Chain | Residue |
| A | ARG163 |
| A | ARG169 |
| A | SER171 |
| A | MG500 |
| A | HOH606 |
| A | HOH607 |
| A | HOH608 |
| A | HOH621 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 503 |
| Chain | Residue |
| A | ASP209 |
| A | ARG211 |
| A | HOH719 |
| A | HOH726 |
| B | ARG13 |
| B | HIS167 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue MG B 500 |
| Chain | Residue |
| B | ASP9 |
| B | POP501 |
| B | POP502 |
| B | HOH615 |
| B | HOH622 |
| site_id | AC6 |
| Number of Residues | 14 |
| Details | binding site for residue POP B 501 |
| Chain | Residue |
| A | ARG211 |
| A | TYR215 |
| B | ASP9 |
| B | GLY10 |
| B | MET11 |
| B | ARG12 |
| B | ARG13 |
| B | TYR26 |
| B | ARG60 |
| B | MG500 |
| B | POP502 |
| B | HOH615 |
| B | HOH622 |
| B | HOH743 |
| site_id | AC7 |
| Number of Residues | 19 |
| Details | binding site for residue POP B 502 |
| Chain | Residue |
| A | PHE180 |
| A | ARG211 |
| A | TYR212 |
| A | GLY213 |
| B | ASP9 |
| B | ASN57 |
| B | ARG60 |
| B | ARG163 |
| B | ARG169 |
| B | SER171 |
| B | PHE173 |
| B | MG500 |
| B | POP501 |
| B | HOH613 |
| B | HOH615 |
| B | HOH622 |
| B | HOH640 |
| B | HOH677 |
| B | HOH680 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue MG C 500 |
| Chain | Residue |
| C | ASP9 |
| C | POP501 |
| C | SO4502 |
| C | HOH612 |
| site_id | AC9 |
| Number of Residues | 11 |
| Details | binding site for residue POP C 501 |
| Chain | Residue |
| C | ASP9 |
| C | GLY10 |
| C | MET11 |
| C | ARG12 |
| C | ARG13 |
| C | TYR26 |
| C | MG500 |
| C | HOH607 |
| C | HOH612 |
| C | HOH713 |
| C | HOH800 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 C 502 |
| Chain | Residue |
| C | ARG163 |
| C | ARG169 |
| C | SER171 |
| C | MG500 |
| C | HOH601 |
| C | HOH611 |
| C | HOH615 |
| site_id | AD2 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 C 503 |
| Chain | Residue |
| C | ASP209 |
| C | ARG211 |
| C | HOH613 |
| C | HOH690 |
| C | HOH709 |
| C | HOH794 |
| C | HOH804 |
| D | ARG13 |
| D | HIS167 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue MG D 500 |
| Chain | Residue |
| D | POP501 |
| D | POP502 |
| D | HOH615 |
| D | HOH627 |
| D | ASP9 |
| site_id | AD4 |
| Number of Residues | 14 |
| Details | binding site for residue POP D 501 |
| Chain | Residue |
| C | ARG211 |
| C | TYR215 |
| D | ASP9 |
| D | GLY10 |
| D | MET11 |
| D | ARG12 |
| D | ARG13 |
| D | TYR26 |
| D | ARG60 |
| D | MG500 |
| D | POP502 |
| D | HOH615 |
| D | HOH627 |
| D | HOH713 |
| site_id | AD5 |
| Number of Residues | 19 |
| Details | binding site for residue POP D 502 |
| Chain | Residue |
| C | PHE180 |
| C | ARG211 |
| C | TYR212 |
| C | GLY213 |
| D | ASP9 |
| D | ASN57 |
| D | ARG60 |
| D | ARG163 |
| D | ARG169 |
| D | SER171 |
| D | PHE173 |
| D | MG500 |
| D | POP501 |
| D | HOH615 |
| D | HOH626 |
| D | HOH627 |
| D | HOH642 |
| D | HOH652 |
| D | HOH670 |
