5XK6
Structure of a prenyltransferase soaked with IPP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0002094 | molecular_function | polyprenyltransferase activity |
A | 0016094 | biological_process | polyprenol biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
A | 0046872 | molecular_function | metal ion binding |
B | 0002094 | molecular_function | polyprenyltransferase activity |
B | 0016094 | biological_process | polyprenol biosynthetic process |
B | 0016740 | molecular_function | transferase activity |
B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
B | 0046872 | molecular_function | metal ion binding |
C | 0002094 | molecular_function | polyprenyltransferase activity |
C | 0016094 | biological_process | polyprenol biosynthetic process |
C | 0016740 | molecular_function | transferase activity |
C | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
C | 0046872 | molecular_function | metal ion binding |
D | 0002094 | molecular_function | polyprenyltransferase activity |
D | 0016094 | biological_process | polyprenol biosynthetic process |
D | 0016740 | molecular_function | transferase activity |
D | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue MG A 500 |
Chain | Residue |
A | ASP9 |
A | POP501 |
A | SO4502 |
A | HOH606 |
A | HOH621 |
site_id | AC2 |
Number of Residues | 10 |
Details | binding site for residue POP A 501 |
Chain | Residue |
A | ARG13 |
A | TYR26 |
A | ARG60 |
A | MG500 |
A | HOH606 |
A | HOH609 |
A | ASP9 |
A | GLY10 |
A | MET11 |
A | ARG12 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue SO4 A 502 |
Chain | Residue |
A | ARG163 |
A | ARG169 |
A | SER171 |
A | MG500 |
A | HOH606 |
A | HOH607 |
A | HOH608 |
A | HOH621 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 503 |
Chain | Residue |
A | ASP209 |
A | ARG211 |
A | HOH719 |
A | HOH726 |
B | ARG13 |
B | HIS167 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue MG B 500 |
Chain | Residue |
B | ASP9 |
B | POP501 |
B | POP502 |
B | HOH615 |
B | HOH622 |
site_id | AC6 |
Number of Residues | 14 |
Details | binding site for residue POP B 501 |
Chain | Residue |
A | ARG211 |
A | TYR215 |
B | ASP9 |
B | GLY10 |
B | MET11 |
B | ARG12 |
B | ARG13 |
B | TYR26 |
B | ARG60 |
B | MG500 |
B | POP502 |
B | HOH615 |
B | HOH622 |
B | HOH743 |
site_id | AC7 |
Number of Residues | 19 |
Details | binding site for residue POP B 502 |
Chain | Residue |
A | PHE180 |
A | ARG211 |
A | TYR212 |
A | GLY213 |
B | ASP9 |
B | ASN57 |
B | ARG60 |
B | ARG163 |
B | ARG169 |
B | SER171 |
B | PHE173 |
B | MG500 |
B | POP501 |
B | HOH613 |
B | HOH615 |
B | HOH622 |
B | HOH640 |
B | HOH677 |
B | HOH680 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue MG C 500 |
Chain | Residue |
C | ASP9 |
C | POP501 |
C | SO4502 |
C | HOH612 |
site_id | AC9 |
Number of Residues | 11 |
Details | binding site for residue POP C 501 |
Chain | Residue |
C | ASP9 |
C | GLY10 |
C | MET11 |
C | ARG12 |
C | ARG13 |
C | TYR26 |
C | MG500 |
C | HOH607 |
C | HOH612 |
C | HOH713 |
C | HOH800 |
site_id | AD1 |
Number of Residues | 7 |
Details | binding site for residue SO4 C 502 |
Chain | Residue |
C | ARG163 |
C | ARG169 |
C | SER171 |
C | MG500 |
C | HOH601 |
C | HOH611 |
C | HOH615 |
site_id | AD2 |
Number of Residues | 9 |
Details | binding site for residue SO4 C 503 |
Chain | Residue |
C | ASP209 |
C | ARG211 |
C | HOH613 |
C | HOH690 |
C | HOH709 |
C | HOH794 |
C | HOH804 |
D | ARG13 |
D | HIS167 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue MG D 500 |
Chain | Residue |
D | POP501 |
D | POP502 |
D | HOH615 |
D | HOH627 |
D | ASP9 |
site_id | AD4 |
Number of Residues | 14 |
Details | binding site for residue POP D 501 |
Chain | Residue |
C | ARG211 |
C | TYR215 |
D | ASP9 |
D | GLY10 |
D | MET11 |
D | ARG12 |
D | ARG13 |
D | TYR26 |
D | ARG60 |
D | MG500 |
D | POP502 |
D | HOH615 |
D | HOH627 |
D | HOH713 |
site_id | AD5 |
Number of Residues | 19 |
Details | binding site for residue POP D 502 |
Chain | Residue |
C | PHE180 |
C | ARG211 |
C | TYR212 |
C | GLY213 |
D | ASP9 |
D | ASN57 |
D | ARG60 |
D | ARG163 |
D | ARG169 |
D | SER171 |
D | PHE173 |
D | MG500 |
D | POP501 |
D | HOH615 |
D | HOH626 |
D | HOH627 |
D | HOH642 |
D | HOH652 |
D | HOH670 |