5XDG
Crystal structure of tertiary complex of TdsC from Paenibacillus sp. A11-2 with FMN and dibenzothiophene sulfoxide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| A | 0004497 | molecular_function | monooxygenase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006552 | biological_process | L-leucine catabolic process |
| A | 0008470 | molecular_function | 3-methylbutanoyl-CoA dehydrogenase activity |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| B | 0004497 | molecular_function | monooxygenase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006552 | biological_process | L-leucine catabolic process |
| B | 0008470 | molecular_function | 3-methylbutanoyl-CoA dehydrogenase activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| C | 0004497 | molecular_function | monooxygenase activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006552 | biological_process | L-leucine catabolic process |
| C | 0008470 | molecular_function | 3-methylbutanoyl-CoA dehydrogenase activity |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| D | 0004497 | molecular_function | monooxygenase activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006552 | biological_process | L-leucine catabolic process |
| D | 0008470 | molecular_function | 3-methylbutanoyl-CoA dehydrogenase activity |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue FMN A 501 |
| Chain | Residue |
| A | HIS89 |
| A | 83U504 |
| A | HOH616 |
| A | HOH628 |
| A | HOH645 |
| A | HOH658 |
| B | ARG279 |
| B | GLY364 |
| B | ALA365 |
| B | ARG366 |
| B | HOH652 |
| A | TYR93 |
| A | ASN126 |
| A | SER128 |
| A | SER129 |
| A | PHE158 |
| A | SER160 |
| A | THR384 |
| A | HIS388 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 A 502 |
| Chain | Residue |
| A | ARG63 |
| A | LYS110 |
| A | HOH605 |
| A | HOH634 |
| A | HOH635 |
| C | ARG183 |
| C | THR230 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 503 |
| Chain | Residue |
| A | ARG319 |
| A | ARG326 |
| A | GLN333 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue 83U A 504 |
| Chain | Residue |
| A | SER96 |
| A | ASN97 |
| A | ASN126 |
| A | SER128 |
| A | PHE412 |
| A | FMN501 |
| site_id | AC5 |
| Number of Residues | 20 |
| Details | binding site for residue FMN B 501 |
| Chain | Residue |
| A | ARG279 |
| A | GLY364 |
| A | ALA365 |
| A | ARG366 |
| A | HOH676 |
| B | HIS89 |
| B | TYR93 |
| B | ASN126 |
| B | SER128 |
| B | SER129 |
| B | PHE158 |
| B | SER160 |
| B | HIS388 |
| B | 83U503 |
| B | HOH604 |
| B | HOH615 |
| B | HOH625 |
| B | HOH632 |
| B | HOH678 |
| B | HOH846 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 502 |
| Chain | Residue |
| B | ARG319 |
| B | ARG326 |
| B | GLN333 |
| site_id | AC7 |
| Number of Residues | 11 |
| Details | binding site for residue 83U B 503 |
| Chain | Residue |
| B | SER96 |
| B | ASN97 |
| B | ASN126 |
| B | SER128 |
| B | SER129 |
| B | TRP247 |
| B | HIS388 |
| B | PHE412 |
| B | TYR413 |
| B | FMN501 |
| B | HOH763 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | binding site for residue GOL B 504 |
| Chain | Residue |
| B | GLN109 |
| B | ARG112 |
| B | TRP113 |
| B | ASP225 |
| B | HOH657 |
| B | HOH666 |
| B | HOH720 |
| B | HOH809 |
| site_id | AC9 |
| Number of Residues | 20 |
| Details | binding site for residue FMN C 501 |
| Chain | Residue |
| C | HIS89 |
| C | TYR93 |
| C | ASN126 |
| C | SER128 |
| C | SER129 |
| C | PHE158 |
| C | SER160 |
| C | HIS388 |
| C | 83U503 |
| C | HOH622 |
| C | HOH623 |
| C | HOH642 |
| C | HOH662 |
| C | HOH694 |
| C | HOH808 |
| D | ARG279 |
| D | GLY364 |
| D | ALA365 |
| D | ARG366 |
| D | HOH671 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 502 |
| Chain | Residue |
| C | GLN333 |
| C | ARG319 |
| C | ARG326 |
| site_id | AD2 |
| Number of Residues | 11 |
| Details | binding site for residue 83U C 503 |
| Chain | Residue |
| C | SER96 |
| C | ASN97 |
| C | ASN126 |
| C | SER128 |
| C | SER129 |
| C | TRP247 |
| C | HIS388 |
| C | PHE412 |
| C | TYR413 |
| C | FMN501 |
| C | HOH650 |
| site_id | AD3 |
| Number of Residues | 21 |
| Details | binding site for residue FMN D 501 |
| Chain | Residue |
| C | ARG279 |
| C | GLY364 |
| C | ALA365 |
| C | ARG366 |
| C | HOH726 |
| D | HIS89 |
| D | TYR93 |
| D | ASN126 |
| D | SER128 |
| D | SER129 |
| D | PHE158 |
| D | SER160 |
| D | THR384 |
| D | HIS388 |
| D | 83U503 |
| D | HOH628 |
| D | HOH642 |
| D | HOH672 |
| D | HOH697 |
| D | HOH712 |
| D | HOH828 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 D 502 |
| Chain | Residue |
| D | ARG319 |
| D | ARG326 |
| D | GLN333 |
| D | HOH861 |
| site_id | AD5 |
| Number of Residues | 12 |
| Details | binding site for residue 83U D 503 |
| Chain | Residue |
| D | SER96 |
| D | ASN97 |
| D | ASN126 |
| D | SER128 |
| D | SER129 |
| D | TRP247 |
| D | PHE255 |
| D | HIS388 |
| D | PHE412 |
| D | TYR413 |
| D | FMN501 |
| D | HOH682 |
| site_id | AD6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 504 |
| Chain | Residue |
| D | GLN109 |
| D | ARG112 |
| D | TRP113 |
| D | ASP225 |
| D | HOH645 |
| D | HOH668 |
| D | HOH794 |
