5XB7
GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004565 | molecular_function | beta-galactosidase activity |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0009341 | cellular_component | beta-galactosidase complex |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004565 | molecular_function | beta-galactosidase activity |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0009341 | cellular_component | beta-galactosidase complex |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004565 | molecular_function | beta-galactosidase activity |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0009341 | cellular_component | beta-galactosidase complex |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004565 | molecular_function | beta-galactosidase activity |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0009341 | cellular_component | beta-galactosidase complex |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0004565 | molecular_function | beta-galactosidase activity |
| E | 0005975 | biological_process | carbohydrate metabolic process |
| E | 0009341 | cellular_component | beta-galactosidase complex |
| E | 0016787 | molecular_function | hydrolase activity |
| E | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0004565 | molecular_function | beta-galactosidase activity |
| F | 0005975 | biological_process | carbohydrate metabolic process |
| F | 0009341 | cellular_component | beta-galactosidase complex |
| F | 0016787 | molecular_function | hydrolase activity |
| F | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 801 |
| Chain | Residue |
| A | GLY424 |
| A | GLY425 |
| A | ARG528 |
| A | HOH988 |
| site_id | AC2 |
| Number of Residues | 11 |
| Details | binding site for residue GOL A 802 |
| Chain | Residue |
| A | ASP278 |
| A | GLU311 |
| A | TRP345 |
| A | GLU355 |
| A | HOH964 |
| A | HOH1091 |
| A | TYR85 |
| A | ARG112 |
| A | ASN150 |
| A | GLU151 |
| A | ASN247 |
| site_id | AC3 |
| Number of Residues | 10 |
| Details | binding site for residue GOL A 803 |
| Chain | Residue |
| A | PHE441 |
| A | GLU442 |
| A | ASN444 |
| A | LEU620 |
| A | ALA621 |
| A | GLY622 |
| A | VAL624 |
| A | CYS625 |
| A | HOH983 |
| A | HOH1164 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 804 |
| Chain | Residue |
| A | ARG112 |
| A | GLU151 |
| A | TRP358 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | binding site for residue GOL A 805 |
| Chain | Residue |
| A | HIS160 |
| A | HOH986 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue GOL A 806 |
| Chain | Residue |
| A | ARG380 |
| A | HOH972 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 807 |
| Chain | Residue |
| A | GLY205 |
| A | ARG212 |
| A | GOL808 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue GOL A 808 |
| Chain | Residue |
| A | GOL807 |
| D | PHE354 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 809 |
| Chain | Residue |
| C | ILE207 |
| C | MET423 |
| C | GOL808 |
| site_id | AD1 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 810 |
| Chain | Residue |
| A | ALA597 |
| A | ARG601 |
| A | HOH1002 |
| A | HOH1236 |
| site_id | AD2 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 B 801 |
| Chain | Residue |
| B | GLY424 |
| B | GLY425 |
| B | ARG528 |
| B | HOH1081 |
| site_id | AD3 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 B 802 |
| Chain | Residue |
| B | ARG171 |
| B | ASN176 |
| B | TRP197 |
| D | ARG171 |
| D | ASN176 |
| D | TRP197 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 B 803 |
| Chain | Residue |
| B | ARG601 |
| B | HOH902 |
| site_id | AD5 |
| Number of Residues | 11 |
| Details | binding site for residue GOL B 804 |
| Chain | Residue |
| B | TYR85 |
| B | ARG112 |
| B | ASN150 |
| B | GLU151 |
| B | ASN247 |
| B | ASP278 |
| B | GLU311 |
| B | TRP345 |
| B | GLU355 |
| B | HOH973 |
| B | HOH1029 |
| site_id | AD6 |
| Number of Residues | 8 |
| Details | binding site for residue GOL B 805 |
| Chain | Residue |
| B | GLU442 |
| B | ASN444 |
| B | LEU620 |
| B | ALA621 |
| B | GLY622 |
| B | VAL624 |
| B | HOH945 |
| B | HOH983 |
| site_id | AD7 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 806 |
| Chain | Residue |
| B | LYS153 |
| B | TYR154 |
| B | TYR155 |
| B | ASP156 |
| B | ALA262 |
| site_id | AD8 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 807 |
| Chain | Residue |
| B | HIS562 |
| B | ARG580 |
| B | ALA582 |
| B | ASP587 |
| B | HOH1178 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue GOL B 808 |
| Chain | Residue |
| B | PHE354 |
| F | MET423 |
| site_id | AE1 |
| Number of Residues | 3 |
| Details | binding site for residue GOL B 809 |
| Chain | Residue |
| B | ARG239 |
| B | ASP240 |
| B | ASP241 |
| site_id | AE2 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 810 |
| Chain | Residue |
| B | ARG112 |
| B | GLU151 |
| B | TRP358 |
| B | HOH904 |
| B | HOH1030 |
| site_id | AE3 |
| Number of Residues | 1 |
| Details | binding site for residue GOL B 811 |
| Chain | Residue |
| B | ILE274 |
| site_id | AE4 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 812 |
| Chain | Residue |
| B | VAL445 |
| B | GLU446 |
| B | ASN398 |
| B | ALA399 |
| B | VAL400 |
| site_id | AE5 |
| Number of Residues | 7 |
| Details | binding site for residue GOL B 813 |
| Chain | Residue |
| B | ASP97 |
| B | THR101 |
| B | SER159 |
| B | HIS160 |
| B | HOH930 |
| B | HOH1020 |
| B | HOH1038 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue GOL B 814 |
| Chain | Residue |
| B | GLY205 |
| B | SER206 |
| B | ARG212 |
| site_id | AE7 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 815 |
| Chain | Residue |
| B | LYS396 |
| B | ARG397 |
| B | ASN398 |
| B | ASP448 |
| B | HOH977 |
| site_id | AE8 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 B 816 |
| Chain | Residue |
| A | ARG651 |
| B | ASP681 |
| B | ALA682 |
| B | HOH1027 |
| site_id | AE9 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 801 |
| Chain | Residue |
| C | GLY424 |
| C | GLY425 |
| C | ARG528 |
| site_id | AF1 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 802 |
| Chain | Residue |
| C | ASP598 |
| C | ARG601 |
| C | HOH1074 |
| site_id | AF2 |
| Number of Residues | 13 |
| Details | binding site for residue GOL C 803 |
| Chain | Residue |
| C | TYR85 |
| C | ARG112 |
| C | ASN150 |
| C | GLU151 |
| C | ASN247 |
| C | ASP278 |
| C | GLU311 |
| C | TRP345 |
| C | GLU355 |
| C | GOL806 |
| C | HOH979 |
| C | HOH995 |
| C | HOH1041 |
| site_id | AF3 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 804 |
| Chain | Residue |
| A | GLU106 |
| A | HIS108 |
| C | THR102 |
| C | GLY105 |
| C | ASP202 |
| C | THR204 |
| C | HOH923 |
| site_id | AF4 |
| Number of Residues | 2 |
| Details | binding site for residue GOL C 805 |
| Chain | Residue |
| C | HIS160 |
| C | HOH1023 |
| site_id | AF5 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 806 |
| Chain | Residue |
| C | ARG112 |
| C | GLU151 |
| C | ASP249 |
| C | TRP252 |
| C | TYR280 |
| C | GOL803 |
| C | HOH982 |
| site_id | AF6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 807 |
| Chain | Residue |
| C | ASP97 |
| C | THR101 |
| C | SER159 |
| C | HIS160 |
| C | HOH923 |
| C | HOH967 |
| C | HOH1083 |
| site_id | AF7 |
| Number of Residues | 4 |
| Details | binding site for residue GOL C 808 |
| Chain | Residue |
| A | GOL809 |
| C | GLY205 |
| C | SER206 |
| C | ILE207 |
| site_id | AF8 |
| Number of Residues | 10 |
| Details | binding site for residue GOL C 809 |
| Chain | Residue |
| C | PHE441 |
| C | GLU442 |
| C | ASN444 |
| C | LEU620 |
| C | ALA621 |
| C | GLY622 |
| C | VAL624 |
| C | CYS625 |
| C | GOL810 |
| C | HOH1123 |
| site_id | AF9 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 810 |
| Chain | Residue |
| C | THR623 |
| C | CYS625 |
| C | LEU641 |
| C | ASN642 |
| C | TYR643 |
| C | SER644 |
| C | GOL809 |
| site_id | AG1 |
| Number of Residues | 1 |
| Details | binding site for residue GOL C 811 |
| Chain | Residue |
| C | ARG380 |
| site_id | AG2 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 D 801 |
| Chain | Residue |
| D | GLY424 |
| D | GLY425 |
| D | ARG528 |
| site_id | AG3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 D 802 |
| Chain | Residue |
| D | ALA597 |
| D | ARG601 |
| D | HOH903 |
| site_id | AG4 |
| Number of Residues | 10 |
| Details | binding site for residue GOL D 803 |
| Chain | Residue |
| D | ARG112 |
| D | ASN150 |
| D | GLU151 |
| D | ASN247 |
| D | ASP278 |
| D | GLU311 |
| D | TRP345 |
| D | GLU355 |
| D | HOH975 |
| D | HOH1044 |
| site_id | AG5 |
| Number of Residues | 2 |
| Details | binding site for residue GOL D 804 |
| Chain | Residue |
| D | GLY205 |
| D | ARG212 |
| site_id | AG6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 805 |
| Chain | Residue |
| D | PHE441 |
| D | GLU442 |
| D | ASN444 |
| D | ALA621 |
| D | GLY622 |
| D | VAL624 |
| D | HOH1038 |
| site_id | AG7 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 806 |
| Chain | Residue |
| D | ASP97 |
| D | THR101 |
| D | SER159 |
| D | HIS160 |
| D | HOH932 |
| D | HOH1032 |
| D | HOH1101 |
| site_id | AG8 |
| Number of Residues | 3 |
| Details | binding site for residue GOL D 807 |
| Chain | Residue |
| D | ARG377 |
| D | ARG380 |
| D | HOH919 |
| site_id | AG9 |
| Number of Residues | 5 |
| Details | binding site for residue GOL D 808 |
| Chain | Residue |
| D | ASP97 |
| D | ASN119 |
| D | HOH1218 |
| E | ASN119 |
| E | ALA121 |
| site_id | AH1 |
| Number of Residues | 2 |
| Details | binding site for residue GOL D 809 |
| Chain | Residue |
| D | GLU173 |
| D | ASN503 |
| site_id | AH2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 E 801 |
| Chain | Residue |
| E | THR419 |
| E | GLY424 |
| E | GLY425 |
| E | ARG528 |
| E | HOH995 |
| site_id | AH3 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 E 802 |
| Chain | Residue |
| A | ARG171 |
| A | TRP197 |
| E | ARG171 |
| E | ASN176 |
| E | TRP197 |
| E | HOH950 |
| site_id | AH4 |
| Number of Residues | 10 |
| Details | binding site for residue GOL E 803 |
| Chain | Residue |
| E | ARG112 |
| E | ASN150 |
| E | GLU151 |
| E | ASN247 |
| E | ASP278 |
| E | GLU311 |
| E | TRP345 |
| E | GLU355 |
| E | HOH932 |
| E | HOH933 |
| site_id | AH5 |
| Number of Residues | 11 |
| Details | binding site for residue GOL E 804 |
| Chain | Residue |
| E | PHE441 |
| E | GLU442 |
| E | ASN444 |
| E | LEU620 |
| E | ALA621 |
| E | GLY622 |
| E | VAL624 |
| E | CYS625 |
| E | TYR643 |
| E | HOH910 |
| E | HOH1097 |
| site_id | AH6 |
| Number of Residues | 6 |
| Details | binding site for residue GOL E 805 |
| Chain | Residue |
| E | THR102 |
| E | GLY105 |
| E | ASP202 |
| E | THR204 |
| E | HOH913 |
| F | HIS108 |
| site_id | AH7 |
| Number of Residues | 7 |
| Details | binding site for residue GOL E 806 |
| Chain | Residue |
| E | ASP97 |
| E | THR101 |
| E | SER159 |
| E | HIS160 |
| E | HOH913 |
| E | HOH974 |
| E | HOH1224 |
| site_id | AH8 |
| Number of Residues | 3 |
| Details | binding site for residue GOL E 807 |
| Chain | Residue |
| E | ARG26 |
| E | MET33 |
| E | PHE366 |
| site_id | AH9 |
| Number of Residues | 1 |
| Details | binding site for residue GOL E 808 |
| Chain | Residue |
| E | ARG380 |
| site_id | AI1 |
| Number of Residues | 6 |
| Details | binding site for residue GOL E 809 |
| Chain | Residue |
| E | HIS562 |
| E | ARG580 |
| E | ALA582 |
| E | ASP587 |
| E | ASN610 |
| E | HOH1148 |
| site_id | AI2 |
| Number of Residues | 3 |
| Details | binding site for residue GOL E 810 |
| Chain | Residue |
| E | GLY205 |
| E | SER206 |
| E | ARG212 |
| site_id | AI3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 E 811 |
| Chain | Residue |
| E | ASP598 |
| E | ARG601 |
| E | HOH1155 |
| site_id | AI4 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 F 801 |
| Chain | Residue |
| F | GLY424 |
| F | GLY425 |
| F | ARG528 |
| site_id | AI5 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 F 802 |
| Chain | Residue |
| F | ALA597 |
| F | ASP598 |
| F | ARG601 |
| F | HOH1040 |
| site_id | AI6 |
| Number of Residues | 11 |
| Details | binding site for residue GOL F 803 |
| Chain | Residue |
| F | TYR85 |
| F | ARG112 |
| F | ASN150 |
| F | GLU151 |
| F | ASN247 |
| F | ASP278 |
| F | GLU311 |
| F | TRP345 |
| F | GLU355 |
| F | HOH977 |
| F | HOH1073 |
| site_id | AI7 |
| Number of Residues | 8 |
| Details | binding site for residue GOL F 804 |
| Chain | Residue |
| F | PHE441 |
| F | GLU442 |
| F | ASN444 |
| F | ALA621 |
| F | GLY622 |
| F | VAL624 |
| F | HOH1090 |
| F | HOH1200 |
| site_id | AI8 |
| Number of Residues | 4 |
| Details | binding site for residue GOL F 805 |
| Chain | Residue |
| F | ARG239 |
| F | ASP240 |
| F | ASP241 |
| F | HOH901 |
| site_id | AI9 |
| Number of Residues | 3 |
| Details | binding site for residue GOL F 806 |
| Chain | Residue |
| F | ARG377 |
| F | ARG380 |
| F | HOH1014 |
| site_id | AJ1 |
| Number of Residues | 1 |
| Details | binding site for residue GOL F 807 |
| Chain | Residue |
| F | SER206 |
| site_id | AJ2 |
| Number of Residues | 4 |
| Details | binding site for residue GOL F 808 |
| Chain | Residue |
| F | ARG123 |
| F | GLN222 |
| F | HOH967 |
| F | HOH1081 |
| site_id | AJ3 |
| Number of Residues | 5 |
| Details | binding site for residue GOL F 809 |
| Chain | Residue |
| F | LYS396 |
| F | ARG397 |
| F | SER628 |
| F | HOH1006 |
| F | HOH1196 |
| site_id | AJ4 |
| Number of Residues | 2 |
| Details | binding site for residue GOL F 810 |
| Chain | Residue |
| F | HIS562 |
| F | ARG580 |
| site_id | AJ5 |
| Number of Residues | 7 |
| Details | binding site for residue GOL F 811 |
| Chain | Residue |
| F | ASP97 |
| F | THR101 |
| F | SER159 |
| F | HIS160 |
| F | HOH936 |
| F | HOH1021 |
| F | HOH1048 |
| site_id | AJ6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL F 812 |
| Chain | Residue |
| A | TYR95 |
| A | ASN119 |
| F | ASN119 |
| F | ALA121 |
| F | HOH1226 |
| F | HOH1233 |
| F | HOH1279 |
| site_id | AJ7 |
| Number of Residues | 1 |
| Details | binding site for residue GOL F 813 |
| Chain | Residue |
| F | PHE243 |
| site_id | AJ8 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 F 814 |
| Chain | Residue |
| E | SER232 |
| F | ARG696 |
| F | GLN697 |
| F | HOH906 |
| F | HOH914 |
