Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005524 | molecular_function | ATP binding |
A | 0008756 | molecular_function | o-succinylbenzoate-CoA ligase activity |
A | 0009234 | biological_process | menaquinone biosynthetic process |
A | 0016405 | molecular_function | CoA-ligase activity |
A | 0016874 | molecular_function | ligase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0008756 | molecular_function | o-succinylbenzoate-CoA ligase activity |
B | 0009234 | biological_process | menaquinone biosynthetic process |
B | 0016405 | molecular_function | CoA-ligase activity |
B | 0016874 | molecular_function | ligase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0008756 | molecular_function | o-succinylbenzoate-CoA ligase activity |
C | 0009234 | biological_process | menaquinone biosynthetic process |
C | 0016405 | molecular_function | CoA-ligase activity |
C | 0016874 | molecular_function | ligase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0008756 | molecular_function | o-succinylbenzoate-CoA ligase activity |
D | 0009234 | biological_process | menaquinone biosynthetic process |
D | 0016405 | molecular_function | CoA-ligase activity |
D | 0016874 | molecular_function | ligase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 40 |
Details | binding site for residue S0N A 501 |
Chain | Residue |
A | LYS86 |
A | GLY264 |
A | GLY287 |
A | SER293 |
A | GLN294 |
A | SER389 |
A | GLY390 |
A | GLY391 |
A | GLU392 |
A | LYS421 |
A | TRP422 |
A | PRO193 |
A | TYR452 |
A | MG502 |
A | CA505 |
A | HOH625 |
A | HOH638 |
A | HOH659 |
A | HOH678 |
A | HOH706 |
A | HOH712 |
A | HOH720 |
A | ILE197 |
A | HOH749 |
A | HOH761 |
A | HOH787 |
A | HOH810 |
A | HOH871 |
A | HOH881 |
A | HOH893 |
A | HOH917 |
D | SER220 |
D | VAL221 |
A | SER198 |
D | SER222 |
A | ARG218 |
A | PHE219 |
A | ALA238 |
A | LEU261 |
A | GLY263 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MG A 502 |
Chain | Residue |
A | PHE219 |
A | S0N501 |
A | HOH881 |
A | HOH912 |
A | HOH946 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue MG A 503 |
Chain | Residue |
A | ASN7 |
A | HIS71 |
A | PHE74 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue CA A 505 |
Chain | Residue |
A | HIS196 |
A | ILE197 |
A | THR289 |
A | S0N501 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue CA A 506 |
Chain | Residue |
A | GLU355 |
A | PHE358 |
site_id | AC6 |
Number of Residues | 2 |
Details | binding site for residue NA A 507 |
Chain | Residue |
A | HOH751 |
A | HOH839 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue PEG A 508 |
Chain | Residue |
A | LEU180 |
A | GLY181 |
A | HOH612 |
A | HOH764 |
C | ILE182 |
C | THR183 |
C | GLU184 |
site_id | AC8 |
Number of Residues | 1 |
Details | binding site for residue PEG A 509 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue PEG A 510 |
Chain | Residue |
A | GLN14 |
A | PHE35 |
A | HOH656 |
A | HOH679 |
site_id | AD1 |
Number of Residues | 39 |
Details | binding site for residue S0N B 501 |
Chain | Residue |
B | HOH718 |
B | HOH799 |
B | HOH814 |
B | HOH872 |
B | HOH893 |
C | SER220 |
C | VAL221 |
C | SER222 |
B | LYS86 |
B | LEU192 |
B | PRO193 |
B | HIS196 |
B | ILE197 |
B | SER198 |
B | ARG218 |
B | PHE219 |
B | ALA238 |
B | LEU261 |
B | GLY263 |
B | GLY264 |
B | GLY287 |
B | SER293 |
B | GLN294 |
B | SER389 |
B | GLY390 |
B | GLY391 |
B | GLU392 |
B | LYS421 |
B | TRP422 |
B | LYS451 |
B | TYR452 |
B | MG502 |
B | CA505 |
B | HOH616 |
B | HOH638 |
B | HOH642 |
B | HOH647 |
B | HOH664 |
B | HOH687 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue MG B 502 |
Chain | Residue |
B | PHE219 |
B | S0N501 |
B | HOH898 |
B | HOH916 |
B | HOH942 |
site_id | AD3 |
Number of Residues | 3 |
Details | binding site for residue MG B 503 |
Chain | Residue |
B | THR28 |
B | HOH751 |
B | HOH894 |
site_id | AD4 |
Number of Residues | 5 |
Details | binding site for residue CA B 505 |
Chain | Residue |
B | HIS196 |
B | ILE197 |
B | THR289 |
B | S0N501 |
B | HOH861 |
site_id | AD5 |
Number of Residues | 3 |
Details | binding site for residue NA B 506 |
Chain | Residue |
B | GLU4 |
B | TYR140 |
B | HOH992 |
site_id | AD6 |
Number of Residues | 32 |
Details | binding site for residue S0N D 501 |
Chain | Residue |
D | LYS86 |
D | PRO193 |
D | HIS196 |
D | ILE197 |
D | SER198 |
D | PHE219 |
D | ALA238 |
D | MET242 |
D | LEU261 |
D | GLY263 |
D | GLY264 |
D | GLY287 |
D | SER293 |
D | GLN294 |
D | SER389 |
D | GLY390 |
D | GLY391 |
D | GLU392 |
D | LYS421 |
D | TRP422 |
D | LYS451 |
D | TYR452 |
D | MG502 |
D | HOH620 |
D | HOH641 |
D | HOH671 |
D | HOH707 |
D | HOH709 |
D | HOH763 |
D | HOH834 |
D | HOH850 |
D | HOH855 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue MG D 502 |
Chain | Residue |
A | HOH720 |
A | HOH787 |
D | PHE219 |
D | S0N501 |
D | HOH868 |
site_id | AD8 |
Number of Residues | 3 |
Details | binding site for residue MG D 503 |
Chain | Residue |
D | LYS320 |
D | GLN359 |
D | TRP362 |
site_id | AD9 |
Number of Residues | 1 |
Details | binding site for residue CA D 504 |
site_id | AE1 |
Number of Residues | 2 |
Details | binding site for residue NA D 505 |
Chain | Residue |
D | GLU355 |
D | PHE358 |
site_id | AE2 |
Number of Residues | 4 |
Details | binding site for residue PEG D 506 |
Chain | Residue |
B | LEU180 |
B | THR183 |
D | THR183 |
D | GLU184 |
site_id | AE3 |
Number of Residues | 6 |
Details | binding site for residue PEG D 507 |
Chain | Residue |
B | THR183 |
B | GLU184 |
D | ASN179 |
D | LEU180 |
D | THR183 |
D | ARG258 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue CA C 501 |
Chain | Residue |
C | TRP188 |
C | SER201 |
C | ALA202 |
C | LYS205 |
C | HOH664 |
site_id | AE5 |
Number of Residues | 1 |
Details | binding site for residue CA C 502 |
site_id | AE6 |
Number of Residues | 5 |
Details | binding site for residue CA C 503 |
Chain | Residue |
C | ASN179 |
C | PHE283 |
C | THR297 |
C | LEU298 |
C | SER299 |
site_id | AE7 |
Number of Residues | 3 |
Details | binding site for residue CA C 504 |
Chain | Residue |
C | LYS86 |
C | S0N508 |
C | HOH687 |
site_id | AE8 |
Number of Residues | 3 |
Details | binding site for residue NA C 505 |
Chain | Residue |
C | ASN179 |
C | PHE283 |
C | HOH974 |
site_id | AE9 |
Number of Residues | 5 |
Details | binding site for residue PEG C 506 |
Chain | Residue |
C | MET10 |
C | ALA13 |
C | GLN14 |
C | PHE35 |
C | HOH945 |
site_id | AF1 |
Number of Residues | 3 |
Details | binding site for residue PEG C 507 |
Chain | Residue |
C | GLY366 |
C | LEU368 |
C | ARG382 |
site_id | AF2 |
Number of Residues | 38 |
Details | binding site for residue S0N C 508 |
Chain | Residue |
C | LYS86 |
C | LEU192 |
C | PRO193 |
C | HIS196 |
C | ILE197 |
C | SER198 |
C | PHE219 |
C | ALA238 |
C | MET242 |
C | LEU261 |
C | GLY263 |
C | GLY264 |
C | GLY287 |
C | SER293 |
C | GLN294 |
C | SER389 |
C | GLY390 |
C | GLY391 |
C | GLU392 |
C | LYS421 |
C | TRP422 |
C | LYS451 |
C | TYR452 |
C | CA504 |
C | MG509 |
C | HOH602 |
C | HOH606 |
C | HOH644 |
C | HOH664 |
C | HOH665 |
C | HOH675 |
C | HOH676 |
C | HOH687 |
C | HOH700 |
C | HOH792 |
C | HOH815 |
C | HOH850 |
C | HOH857 |
site_id | AF3 |
Number of Residues | 4 |
Details | binding site for residue MG C 509 |
Chain | Residue |
B | HOH814 |
C | PHE219 |
C | S0N508 |
C | HOH861 |
Functional Information from PROSITE/UniProt
site_id | PS00455 |
Number of Residues | 12 |
Details | AMP_BINDING Putative AMP-binding domain signature. LMYTSGTTGkPK |
Chain | Residue | Details |
A | LEU149-LYS160 | |