5X1L
Vanillate/3-O-methylgallate O-demethylase, LigM, tetrahydrofolate complex form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0032259 | biological_process | methylation |
| A | 0046274 | biological_process | lignin catabolic process |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0032259 | biological_process | methylation |
| B | 0046274 | biological_process | lignin catabolic process |
| C | 0008168 | molecular_function | methyltransferase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0032259 | biological_process | methylation |
| C | 0046274 | biological_process | lignin catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 501 |
| Chain | Residue |
| A | GLY289 |
| A | ASN371 |
| A | TYR372 |
| A | ASN376 |
| A | ASP378 |
| A | HOH626 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 502 |
| Chain | Residue |
| A | TRP256 |
| A | PRO258 |
| A | HOH653 |
| A | HOH778 |
| A | TYR31 |
| A | MET61 |
| A | ARG122 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 503 |
| Chain | Residue |
| A | GLY428 |
| A | THR430 |
| A | LYS432 |
| A | VAL435 |
| A | HOH775 |
| A | HOH835 |
| site_id | AC4 |
| Number of Residues | 16 |
| Details | binding site for residue THG B 501 |
| Chain | Residue |
| B | MET61 |
| B | LYS92 |
| B | GLN93 |
| B | ILE108 |
| B | PHE110 |
| B | VAL120 |
| B | GLY121 |
| B | GLN165 |
| B | PHE188 |
| B | PHE189 |
| B | GLU215 |
| B | TRP256 |
| B | PHE312 |
| B | HOH635 |
| B | HOH647 |
| B | HOH728 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue EDO B 502 |
| Chain | Residue |
| A | HOH618 |
| B | TYR100 |
| B | ASP268 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue EDO B 503 |
| Chain | Residue |
| B | GLY289 |
| B | GLY290 |
| B | ASN371 |
| B | TYR372 |
| B | ASN376 |
| B | ASP378 |
| B | HOH643 |
| site_id | AC7 |
| Number of Residues | 12 |
| Details | binding site for residue THG C 501 |
| Chain | Residue |
| C | GLN57 |
| C | MET61 |
| C | LYS92 |
| C | GLN93 |
| C | ILE108 |
| C | VAL120 |
| C | GLN165 |
| C | PHE188 |
| C | PHE189 |
| C | GLU215 |
| C | TRP256 |
| C | PHE312 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | binding site for residue EDO C 502 |
| Chain | Residue |
| C | GLY289 |
| C | GLY290 |
| C | ASN371 |
| C | TYR372 |
| C | ASN376 |
| C | ASP378 |
| C | HOH601 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 36 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | Site: {"description":"Important for activity","evidences":[{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Site: {"description":"Important for activity","evidences":[{"source":"PubMed","id":"28373573","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
