Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X1K

Vanillate/3-O-methylgallate O-demethylase, LigM, 3-O-methylgallate complex form

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0046274biological_processlignin catabolic process
B0005829cellular_componentcytosol
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0046274biological_processlignin catabolic process
C0005829cellular_componentcytosol
C0008168molecular_functionmethyltransferase activity
C0032259biological_processmethylation
C0046274biological_processlignin catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue 7WR A 501
ChainResidue
ATYR31
APRO258
AHOH648
AHIS60
AMET61
AARG122
ATYR247
APRO248
AASN250
ATHR251
ATRP256

site_idAC2
Number of Residues8
Detailsbinding site for residue TRS A 502
ChainResidue
AGLY428
AGLY429
ATHR430
ALYS432
AVAL435
AGLU436
APRO437
AHOH610

site_idAC3
Number of Residues7
Detailsbinding site for residue PEG A 503
ChainResidue
ALYS225
AASN228
AALA229
AGLU232
BASP268
BLYS269
BHOH679

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 504
ChainResidue
AGLY289
AASN371
ATYR372
AASN376
AASP378
AHOH635

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 505
ChainResidue
AASP145
AGLN158
AARG159
BALA13

site_idAC6
Number of Residues8
Detailsbinding site for residue EDO A 506
ChainResidue
ALEU261
ATYR265
ATYR282
AGLU283
AGLY286
AALA287
AASN374
ATHR375

site_idAC7
Number of Residues11
Detailsbinding site for residue 7WR B 501
ChainResidue
BTYR31
BHIS60
BMET61
BARG122
BTYR247
BPRO248
BASN250
BTHR251
BTRP256
BPRO258
BHOH604

site_idAC8
Number of Residues5
Detailsbinding site for residue TRS B 502
ChainResidue
BGLY428
BTHR430
BLYS432
BVAL435
BPRO437

site_idAC9
Number of Residues6
Detailsbinding site for residue EDO B 503
ChainResidue
BGLY289
BASN371
BTYR372
BASN376
BASP378
BHOH613

site_idAD1
Number of Residues10
Detailsbinding site for residue 7WR C 501
ChainResidue
CTYR29
CTYR31
CHIS60
CMET61
CTYR247
CPRO248
CASN250
CTHR251
CTRP256
CPRO258

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues30
DetailsBINDING: BINDING => ECO:0000269|PubMed:28429420
ChainResidueDetails
ATRP256
BTYR31
BGLN57
BHIS60
BGLN93
BVAL120
BARG122
BGLN165
BGLU215
BTYR247
BTRP256
CTYR31
CGLN57
CHIS60
CGLN93
CVAL120
CARG122
CGLN165
CGLU215
CTYR247
CTRP256
AHIS60
AGLN93
AVAL120
AARG122
ATYR31
AGLN57
AGLN165
AGLU215
ATYR247

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28429420
ChainResidueDetails
AHIS60
BHIS60
CHIS60

site_idSWS_FT_FI3
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28373573, ECO:0000305|PubMed:28429420
ChainResidueDetails
ATYR247
BTYR247
CTYR247

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon