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5X1I

Vanillate/3-O-methylgallate O-demethylase, LigM, substrate free form

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0046274biological_processlignin catabolic process
B0005829cellular_componentcytosol
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0046274biological_processlignin catabolic process
C0005829cellular_componentcytosol
C0008168molecular_functionmethyltransferase activity
C0032259biological_processmethylation
C0046274biological_processlignin catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue EDO A 501
ChainResidue
AGLY289
AASN371
ATYR372
AASN376
AASP378
AHOH651

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 502
ChainResidue
AGLU298
AHOH678
BASP316
ATYR100
ATHR266
AGLY267

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO B 501
ChainResidue
BGLY289
BGLY290
BASN371
BTYR372
BASN376
BASP378
BHOH632

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO B 502
ChainResidue
ALYS185
BASN386
BVAL387
BHOH622

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues30
DetailsBINDING: BINDING => ECO:0000269|PubMed:28429420
ChainResidueDetails
ATYR31
ATRP256
BTYR31
BGLN57
BHIS60
BGLN93
BVAL120
BARG122
BGLN165
BGLU215
BTYR247
AGLN57
BTRP256
CTYR31
CGLN57
CHIS60
CGLN93
CVAL120
CARG122
CGLN165
CGLU215
CTYR247
AHIS60
CTRP256
AGLN93
AVAL120
AARG122
AGLN165
AGLU215
ATYR247

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28429420
ChainResidueDetails
AHIS60
BHIS60
CHIS60

site_idSWS_FT_FI3
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28373573, ECO:0000305|PubMed:28429420
ChainResidueDetails
ATYR247
BTYR247
CTYR247

222036

PDB entries from 2024-07-03

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