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5WZM

Crystal structure of human secreted phospholipase A2 group IIE

Functional Information from GO Data
ChainGOidnamespacecontents
A0004623molecular_functionphospholipase A2 activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005576cellular_componentextracellular region
A0005737cellular_componentcytoplasm
A0006629biological_processlipid metabolic process
A0006644biological_processphospholipid metabolic process
A0006954biological_processinflammatory response
A0016042biological_processlipid catabolic process
A0016787molecular_functionhydrolase activity
A0034374biological_processlow-density lipoprotein particle remodeling
A0042130biological_processnegative regulation of T cell proliferation
A0046470biological_processphosphatidylcholine metabolic process
A0046471biological_processphosphatidylglycerol metabolic process
A0046872molecular_functionmetal ion binding
A0047498molecular_functioncalcium-dependent phospholipase A2 activity
A0050482biological_processarachidonic acid secretion
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CL A 201
ChainResidue
AGLU54
AGLU59
APRO60
ALYS61

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 202
ChainResidue
AARG106
ATRS211
AHOH387

site_idAC3
Number of Residues4
Detailsbinding site for residue CL A 203
ChainResidue
ACYS82
AHOH394
ATHR81
ATHR81

site_idAC4
Number of Residues4
Detailsbinding site for residue CL A 204
ChainResidue
ALYS15
AGLN19
AARG106
ATRS211

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 205
ChainResidue
AGLY73
AILE74
ALYS91

site_idAC6
Number of Residues2
Detailsbinding site for residue CL A 206
ChainResidue
AARG52
AARG92

site_idAC7
Number of Residues5
Detailsbinding site for residue CL A 207
ChainResidue
AILE74
APHE75
ACYS76
ALYS91
AHOH389

site_idAC8
Number of Residues5
Detailsbinding site for residue CA A 209
ChainResidue
AASP22
AGLY24
ATYR111
AASN113
AHOH317

site_idAC9
Number of Residues4
Detailsbinding site for residue CA A 210
ChainResidue
ATYR26
AGLY28
AGLY30
AASP47

site_idAD1
Number of Residues9
Detailsbinding site for residue TRS A 211
ChainResidue
ALYS15
ALEU101
AGLY102
ATYR104
AARG106
ACL202
ACL204
AHOH321
AHOH370

site_idAD2
Number of Residues5
Detailsbinding site for residue TRS A 212
ChainResidue
ALEU66
ALEU66
APHE67
AHOH335
AHOH335

Functional Information from PROSITE/UniProt
site_idPS00118
Number of Residues8
DetailsPA2_HIS Phospholipase A2 histidine active site. CCHaHDcC
ChainResidueDetails
ACYS42-CYS49

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10035
ChainResidueDetails
AHIS46
AASP90

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:28883454, ECO:0007744|PDB:5WZM
ChainResidueDetails
AASP22
AGLY24
ATYR26
AGLY28
AGLY30
AASP47
ATYR111
AASN113

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PDB entries from 2024-04-24

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