5WYA

Structure of amino acid racemase, 2.65 A

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0008483	molecular_function	transaminase activity
A	0016853	molecular_function	isomerase activity
A	0030170	molecular_function	pyridoxal phosphate binding
A	0042802	molecular_function	identical protein binding
B	0008483	molecular_function	transaminase activity
B	0016853	molecular_function	isomerase activity
B	0030170	molecular_function	pyridoxal phosphate binding
B	0042802	molecular_function	identical protein binding
C	0008483	molecular_function	transaminase activity
C	0016853	molecular_function	isomerase activity
C	0030170	molecular_function	pyridoxal phosphate binding
C	0042802	molecular_function	identical protein binding
D	0008483	molecular_function	transaminase activity
D	0016853	molecular_function	isomerase activity
D	0030170	molecular_function	pyridoxal phosphate binding
D	0042802	molecular_function	identical protein binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	20
Details	binding site for residue 7VO A 1001

Chain	Residue
A	ILE24
A	VAL252
A	ASN253
A	LYS280
A	ARG408
A	HOH1107
A	HOH1117
B	TYR84
B	LEU307
B	PHE308
B	THR309
A	ALA54
B	HOH1124
A	SER114
A	GLY115
A	SER116
A	TYR142
A	HIS143
A	GLU217
A	ASP250

---

site_id	AC2
Number of Residues	6
Details	binding site for residue DMS A 1002

Chain	Residue
A	SER178
A	GLU187
A	LYS227
A	PRO229
A	TRP363
A	HOH1205

---

site_id	AC3
Number of Residues	3
Details	binding site for residue DMS A 1003

Chain	Residue
A	GLN133
D	LYS162
D	GLY164

---

site_id	AC4
Number of Residues	6
Details	binding site for residue DMS A 1004

Chain	Residue
A	LYS162
A	GLY164
A	HOH1207
B	ARG127
B	GLY131
D	GLU210

---

site_id	AC5
Number of Residues	2
Details	binding site for residue DMS A 1005

Chain	Residue
A	TYR182
A	GLU185

---

site_id	AC6
Number of Residues	19
Details	binding site for residue 7VO B 1001

Chain	Residue
A	TYR84
A	LEU307
A	PHE308
A	THR309
A	HOH1132
B	ALA54
B	SER114
B	GLY115
B	SER116
B	TYR142
B	HIS143
B	GLU217
B	ASP250
B	VAL252
B	ASN253
B	LYS280
B	ARG408
B	HOH1140
B	HOH1156

---

site_id	AC7
Number of Residues	4
Details	binding site for residue DMS B 1002

Chain	Residue
B	SER178
B	LYS227
B	TRP363
B	HOH1181

---

site_id	AC8
Number of Residues	2
Details	binding site for residue DMS B 1003

Chain	Residue
B	PHE202
B	GLU203

---

site_id	AC9
Number of Residues	6
Details	binding site for residue DMS B 1004

Chain	Residue
B	GLN133
C	LYS162
C	GLY164
C	HOH2224
D	ARG127
D	ARG132

---

site_id	AD1
Number of Residues	4
Details	binding site for residue DMS C 2001

Chain	Residue
B	TYR182
B	HOH1104
C	GLU185
C	HOH2165

---

site_id	AD2
Number of Residues	18
Details	binding site for residue 7VO C 2002

Chain	Residue
C	ALA54
C	SER114
C	GLY115
C	SER116
C	TYR142
C	HIS143
C	GLU217
C	ASP250
C	VAL252
C	ASN253
C	LYS280
C	ARG408
C	HOH2111
C	HOH2119
D	TYR84
D	PHE308
D	THR309
D	HOH1127

---

site_id	AD3
Number of Residues	1
Details	binding site for residue DMS C 2003

Chain	Residue
C	SER178

---

site_id	AD4
Number of Residues	2
Details	binding site for residue DMS C 2004

Chain	Residue
C	PHE202
C	HIS243

---

site_id	AD5
Number of Residues	20
Details	binding site for residue 7VO D 1001

Chain	Residue
D	GLY115
D	SER116
D	TYR142
D	HIS143
D	GLU217
D	ASP222
D	ASP250
D	VAL252
D	ASN253
D	LYS280
D	ARG408
D	HOH1108
D	HOH1112
D	HOH1156
C	TYR84
C	LEU307
C	PHE308
C	THR309
D	ALA54
D	SER114

---

site_id	AD6
Number of Residues	1
Details	binding site for residue DMS D 1002

Chain	Residue
D	LYS46

---

Functional Information from PROSITE/UniProt

site_id	PS00600
Number of Residues	39
Details	AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. FAiDEVnq.GLgRtGkmwaiqqfkdiep...DLMsvGKslaSG

Chain	Residue	Details
A	PHE247-GLY285

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	24
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P22256","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	Modified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"source":"UniProtKB","id":"P22256","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

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