5WWR
Crystal structure of human NSun6/tRNA/SFG
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000049 | molecular_function | tRNA binding |
| A | 0001510 | biological_process | RNA methylation |
| A | 0002946 | biological_process | tRNA C5-cytosine methylation |
| A | 0003723 | molecular_function | RNA binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006400 | biological_process | tRNA modification |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0008173 | molecular_function | RNA methyltransferase activity |
| A | 0008757 | molecular_function | S-adenosylmethionine-dependent methyltransferase activity |
| A | 0016428 | molecular_function | tRNA (cytidine-5-)-methyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0030488 | biological_process | tRNA methylation |
| A | 0032259 | biological_process | methylation |
| B | 0000049 | molecular_function | tRNA binding |
| B | 0001510 | biological_process | RNA methylation |
| B | 0002946 | biological_process | tRNA C5-cytosine methylation |
| B | 0003723 | molecular_function | RNA binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006400 | biological_process | tRNA modification |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0008173 | molecular_function | RNA methyltransferase activity |
| B | 0008757 | molecular_function | S-adenosylmethionine-dependent methyltransferase activity |
| B | 0016428 | molecular_function | tRNA (cytidine-5-)-methyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0030488 | biological_process | tRNA methylation |
| B | 0032259 | biological_process | methylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | binding site for residue SFG A 501 |
| Chain | Residue |
| A | LEU241 |
| A | ASP293 |
| A | GLY294 |
| A | ASP323 |
| C | C72 |
| A | CYS242 |
| A | ALA243 |
| A | ALA244 |
| A | PRO245 |
| A | GLY247 |
| A | LYS248 |
| A | ASP266 |
| A | LYS271 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | binding site for residue SFG B 501 |
| Chain | Residue |
| B | CYS242 |
| B | ALA243 |
| B | ALA244 |
| B | PRO245 |
| B | GLY247 |
| B | LYS248 |
| B | ASP266 |
| B | LYS267 |
| B | LYS271 |
| B | PHE292 |
| B | ASP293 |
| B | GLY294 |
| B | ASP323 |
| D | C72 |
Functional Information from PROSITE/UniProt
| site_id | PS01153 |
| Number of Residues | 12 |
| Details | NOL1_NOP2_SUN NOL1/NOP2/sun family signature. FDRILlDAPCSG |
| Chain | Residue | Details |
| A | PHE317-GLY328 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 184 |
| Details | Domain: {"description":"PUA","evidences":[{"source":"PROSITE-ProRule","id":"PRU00161","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28531330","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5WWS","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 16 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28531330","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5WWS","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01023","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
