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5WRD

Crystal structure of LC3B in complex with FYCO1 LIR

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000421cellular_componentautophagosome membrane
A0000423biological_processmitophagy
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005776cellular_componentautophagosome
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0005875cellular_componentmicrotubule associated complex
A0005930cellular_componentaxoneme
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008017molecular_functionmicrotubule binding
A0008429molecular_functionphosphatidylethanolamine binding
A0009267biological_processcellular response to starvation
A0012505cellular_componentendomembrane system
A0015631molecular_functiontubulin binding
A0016020cellular_componentmembrane
A0019904molecular_functionprotein domain specific binding
A0030424cellular_componentaxon
A0030425cellular_componentdendrite
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0031966cellular_componentmitochondrial membrane
A0043025cellular_componentneuronal cell body
A0044754cellular_componentautolysosome
A0051649biological_processestablishment of localization in cell
A0070254biological_processmucus secretion
A0070257biological_processpositive regulation of mucus secretion
A0097352biological_processautophagosome maturation
B0000045biological_processautophagosome assembly
B0000421cellular_componentautophagosome membrane
B0000423biological_processmitophagy
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005776cellular_componentautophagosome
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0005875cellular_componentmicrotubule associated complex
B0005930cellular_componentaxoneme
B0006914biological_processautophagy
B0006995biological_processcellular response to nitrogen starvation
B0008017molecular_functionmicrotubule binding
B0008429molecular_functionphosphatidylethanolamine binding
B0009267biological_processcellular response to starvation
B0012505cellular_componentendomembrane system
B0015631molecular_functiontubulin binding
B0016020cellular_componentmembrane
B0019904molecular_functionprotein domain specific binding
B0030424cellular_componentaxon
B0030425cellular_componentdendrite
B0031410cellular_componentcytoplasmic vesicle
B0031625molecular_functionubiquitin protein ligase binding
B0031966cellular_componentmitochondrial membrane
B0043025cellular_componentneuronal cell body
B0044754cellular_componentautolysosome
B0051649biological_processestablishment of localization in cell
B0070254biological_processmucus secretion
B0070257biological_processpositive regulation of mucus secretion
B0097352biological_processautophagosome maturation
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue GOL A 201
ChainResidue
APHE80
ALEU81
ASER87
AMET88
AVAL89
AHOH313

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL B 201
ChainResidue
BLYS8
BPHE13
BARG16
BASP104
ALYS42
AGLN43
ALEU44

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Cleavage; by ATG4B => ECO:0000250|UniProtKB:Q9GZQ8
ChainResidueDetails
AGLY120
BGLY120

site_idSWS_FT_FI2
Number of Residues2
DetailsLIPID: Phosphatidylserine amidated glycine; alternate => ECO:0000250|UniProtKB:Q9GZQ8
ChainResidueDetails
AGLY120
BGLY120

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PDB entries from 2024-06-12

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