5WHF
Crystal structure of vimentin coil 1B packed in a high-order filamentous form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005882 | cellular_component | intermediate filament |
| B | 0005882 | cellular_component | intermediate filament |
| C | 0005882 | cellular_component | intermediate filament |
| D | 0005882 | cellular_component | intermediate filament |
| E | 0005882 | cellular_component | intermediate filament |
| F | 0005882 | cellular_component | intermediate filament |
| G | 0005882 | cellular_component | intermediate filament |
| H | 0005882 | cellular_component | intermediate filament |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue GOL G 301 |
| Chain | Residue |
| D | GLN228 |
| G | ASN201 |
| G | THR202 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 16 |
| Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P20152 |
| Chain | Residue | Details |
| A | LYS168 | |
| E | LYS235 | |
| F | LYS168 | |
| F | LYS235 | |
| G | LYS168 | |
| G | LYS235 | |
| H | LYS168 | |
| H | LYS235 | |
| A | LYS235 | |
| B | LYS168 | |
| B | LYS235 | |
| C | LYS168 | |
| C | LYS235 | |
| D | LYS168 | |
| D | LYS235 | |
| E | LYS168 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P20152 |
| Chain | Residue | Details |
| A | LYS188 | |
| B | LYS188 | |
| C | LYS188 | |
| D | LYS188 | |
| E | LYS188 | |
| F | LYS188 | |
| G | LYS188 | |
| H | LYS188 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569 |
| Chain | Residue | Details |
| A | SER214 | |
| B | SER214 | |
| C | SER214 | |
| D | SER214 | |
| E | SER214 | |
| F | SER214 | |
| G | SER214 | |
| H | SER214 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | MOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P20152 |
| Chain | Residue | Details |
| A | LYS223 | |
| B | LYS223 | |
| C | LYS223 | |
| D | LYS223 | |
| E | LYS223 | |
| F | LYS223 | |
| G | LYS223 | |
| H | LYS223 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 8 |
| Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 |
| Chain | Residue | Details |
| A | SER226 | |
| B | SER226 | |
| C | SER226 | |
| D | SER226 | |
| E | SER226 | |
| F | SER226 | |
| G | SER226 | |
| H | SER226 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 16 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733 |
| Chain | Residue | Details |
| A | LYS223 | |
| F | LYS223 | |
| G | LYS223 | |
| H | LYS223 | |
| B | LYS223 | |
| C | LYS223 | |
| D | LYS223 | |
| E | LYS223 |
