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5WHC

USP7 in complex with Cpd2 (4-(3-(1-methylpiperidin-4-yl)-1,2,4-oxadiazol-5-yl)phenol)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A0016579biological_processprotein deubiquitination
B0004843molecular_functioncysteine-type deubiquitinase activity
B0016579biological_processprotein deubiquitination
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue AJJ A 601
ChainResidue
ACYS300
AARG301
ALEU304
AASP305
ATYR348
AASP349
AHIS403

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 602
ChainResidue
AVAL296
APHE409
ATYR465
ATYR514
ATYR224
AASP295

site_idAC3
Number of Residues7
Detailsbinding site for residue AJJ B 601
ChainResidue
BCYS300
BARG301
BLEU304
BASP305
BTYR348
BASP349
BHIS403

site_idAC4
Number of Residues5
Detailsbinding site for residue GOL B 602
ChainResidue
BTYR224
BASP295
BVAL296
BTYR465
BTYR514

Functional Information from PROSITE/UniProt
site_idPS00972
Number of Residues16
DetailsUSP_1 Ubiquitin specific protease (USP) domain signature 1. GLknqGAtCYMNSlLQ
ChainResidueDetails
AGLY215-GLN230

site_idPS00973
Number of Residues18
DetailsUSP_2 Ubiquitin specific protease (USP) domain signature 2. YiLhAVlvHsGdnhg..GHY
ChainResidueDetails
ATYR448-TYR465

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:12507430, ECO:0000269|PubMed:25944111, ECO:0000305|PubMed:11923872, ECO:0000305|PubMed:15053880, ECO:0000305|PubMed:16964248, ECO:0000305|PubMed:18716620, ECO:0000305|PubMed:21745816, ECO:0000305|PubMed:22411829
ChainResidueDetails
ACYS223
BCYS223

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000305|PubMed:12507430
ChainResidueDetails
AHIS464
BHIS464

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 789
ChainResidueDetails
AASN218electrostatic stabiliser
ACYS223nucleofuge, nucleophile, proton acceptor, proton donor
AHIS464proton acceptor, proton donor
AASP481electrostatic stabiliser

site_idMCSA2
Number of Residues4
DetailsM-CSA 789
ChainResidueDetails
BASN218electrostatic stabiliser
BCYS223nucleofuge, nucleophile, proton acceptor, proton donor
BHIS464proton acceptor, proton donor
BASP481electrostatic stabiliser

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PDB entries from 2024-07-10

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