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5WCH

Crystal structure of the catalytic domain of human USP9X

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A0016579biological_processprotein deubiquitination
B0004843molecular_functioncysteine-type deubiquitinase activity
B0016579biological_processprotein deubiquitination
C0004843molecular_functioncysteine-type deubiquitinase activity
C0016579biological_processprotein deubiquitination
D0004843molecular_functioncysteine-type deubiquitinase activity
D0016579biological_processprotein deubiquitination
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 2000
ChainResidue
ACYS1727
AHIS1729
ACYS1771
ACYS1774

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN B 2000
ChainResidue
BCYS1727
BHIS1729
BCYS1771
BCYS1774

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN C 2001
ChainResidue
CHIS1729
CCYS1771
CCYS1774
CCYS1727

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN D 2000
ChainResidue
DCYS1727
DHIS1729
DCYS1771
DCYS1774

Functional Information from PROSITE/UniProt
site_idPS00972
Number of Residues16
DetailsUSP_1 Ubiquitin specific protease (USP) domain signature 1. GLknaGAtCYMNSvIQ
ChainResidueDetails
AGLY1558-GLN1573

site_idPS00973
Number of Residues18
DetailsUSP_2 Ubiquitin specific protease (USP) domain signature 2. YrLvGVlvHsGqasg..GHY
ChainResidueDetails
ATYR1863-TYR1880

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Nucleophile => ECO:0000255|PROSITE-ProRule:PRU10092, ECO:0000255|PROSITE-ProRule:PRU10093, ECO:0000305|PubMed:30914461
ChainResidueDetails
ACYS1566
BCYS1566
CCYS1566
DCYS1566

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10092, ECO:0000255|PROSITE-ProRule:PRU10093
ChainResidueDetails
AHIS1879
BHIS1879
CHIS1879
DHIS1879

site_idSWS_FT_FI3
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:30914461, ECO:0007744|PDB:5WCH
ChainResidueDetails
ACYS1727
CHIS1729
CCYS1771
CCYS1774
DCYS1727
DHIS1729
DCYS1771
DCYS1774
AHIS1729
ACYS1771
ACYS1774
BCYS1727
BHIS1729
BCYS1771
BCYS1774
CCYS1727

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:18691976, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER1600
BSER1600
CSER1600
DSER1600

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PDB entries from 2024-10-02

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