5VRG
Structural insights into lipoprotein N-acylation by Escherichia coli apolipoprotein N-acyltransferase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005515 | molecular_function | protein binding |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0016020 | cellular_component | membrane |
| A | 0016410 | molecular_function | N-acyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016746 | molecular_function | acyltransferase activity |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0042158 | biological_process | lipoprotein biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue OLC A 601 |
| Chain | Residue |
| A | ILE79 |
| A | TRP237 |
| A | GLY342 |
| A | GLU343 |
| A | PHE365 |
| A | TRP415 |
| A | PLM607 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue LNK A 602 |
| Chain | Residue |
| A | LEU347 |
| A | LEU143 |
| A | PRO346 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue PLM A 603 |
| Chain | Residue |
| A | LEU19 |
| A | ALA22 |
| A | CYS23 |
| A | THR25 |
| A | LEU26 |
| A | TYR31 |
| A | SER70 |
| A | ASN73 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue PLM A 604 |
| Chain | Residue |
| A | LEU54 |
| A | LEU103 |
| A | LEU107 |
| A | TYR210 |
| A | GLN212 |
| A | GLN455 |
| A | HOH718 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue PLM A 605 |
| Chain | Residue |
| A | PHE92 |
| A | TRP121 |
| A | MET178 |
| A | ARG193 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue PLM A 606 |
| Chain | Residue |
| A | ILE7 |
| A | GLU8 |
| A | ARG13 |
| A | ALA46 |
| A | ASN50 |
| A | THR119 |
| A | VAL188 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue PLM A 607 |
| Chain | Residue |
| A | LEU97 |
| A | LEU143 |
| A | PHE146 |
| A | PHE416 |
| A | OLC601 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 608 |
| Chain | Residue |
| A | LYS236 |
| A | TRP237 |
| A | ASN412 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 133 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 48 |
| Details | Topological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28885614","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 7 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28885614","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01148","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Active site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01148","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"HAMAP-Rule","id":"MF_01148","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"28675161","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
