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5VJY

Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004170molecular_functiondUTP diphosphatase activity
A0006226biological_processdUMP biosynthetic process
A0009117biological_processnucleotide metabolic process
A0016787molecular_functionhydrolase activity
A0046081biological_processdUTP catabolic process
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0004170molecular_functiondUTP diphosphatase activity
B0006226biological_processdUMP biosynthetic process
B0009117biological_processnucleotide metabolic process
B0016787molecular_functionhydrolase activity
B0046081biological_processdUTP catabolic process
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0004170molecular_functiondUTP diphosphatase activity
C0006226biological_processdUMP biosynthetic process
C0009117biological_processnucleotide metabolic process
C0016787molecular_functionhydrolase activity
C0046081biological_processdUTP catabolic process
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0004170molecular_functiondUTP diphosphatase activity
D0006226biological_processdUMP biosynthetic process
D0009117biological_processnucleotide metabolic process
D0016787molecular_functionhydrolase activity
D0046081biological_processdUTP catabolic process
D0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0004170molecular_functiondUTP diphosphatase activity
E0006226biological_processdUMP biosynthetic process
E0009117biological_processnucleotide metabolic process
E0016787molecular_functionhydrolase activity
E0046081biological_processdUTP catabolic process
E0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue BTB A 201
ChainResidue
ASER67
AALA79
AGLY80
AVAL81
ATYR86
AASN89
AGLY91
AHOH323
AHOH342

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 202
ChainResidue
ATYR35
ALYS48
AASP50
AASN89
AHOH311
CASP122

site_idAC3
Number of Residues10
Detailsbinding site for residue BTB B 200
ChainResidue
BALA79
BGLY80
BVAL81
BTYR86
BASN89
BGLY91
BHOH310
BHOH318
BHOH327
DSER67

site_idAC4
Number of Residues9
Detailsbinding site for residue BTB C 200
ChainResidue
BSER67
CGLY80
CVAL81
CTYR86
CASN89
CGLY91
CHOH317
CHOH346
CHOH371

site_idAC5
Number of Residues9
Detailsbinding site for residue BTB D 200
ChainResidue
CSER67
DGLY80
DVAL81
DVAL82
DTYR86
DASN89
DGLY91
DHOH304
DHOH310

site_idAC6
Number of Residues13
Detailsbinding site for residue BTB E 200
ChainResidue
ELEU46
ESER67
EALA79
EGLY80
EVAL81
EVAL82
ETYR86
EASN89
ELEU90
EGLY91
EHOH301
EHOH326
EHOH331

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PDB entries from 2024-05-15

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