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5VJP

Crystal Structure of Adenine Phosphoribosyltransferase from Saccharomyces cerevisiae Complexed with L-2,5-Dideoxy-2,5-Imino-Altritol 1,6-Bisphosphate (L-DIAB) and Adenine

Functional Information from GO Data
ChainGOidnamespacecontents
A0002055molecular_functionadenine binding
A0003999molecular_functionadenine phosphoribosyltransferase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006166biological_processpurine ribonucleoside salvage
A0006168biological_processadenine salvage
A0016208molecular_functionAMP binding
A0016757molecular_functionglycosyltransferase activity
A0044209biological_processAMP salvage
A0046872molecular_functionmetal ion binding
B0002055molecular_functionadenine binding
B0003999molecular_functionadenine phosphoribosyltransferase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006166biological_processpurine ribonucleoside salvage
B0006168biological_processadenine salvage
B0016208molecular_functionAMP binding
B0016757molecular_functionglycosyltransferase activity
B0044209biological_processAMP salvage
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue IR9 A 201
ChainResidue
AARG69
AHOH306
AHOH310
AHOH328
AHOH329
AHOH331
AHOH335
AHOH353
AHOH355
BGLU106
BTYR107
AASP129
AASP130
AILE131
AALA133
ATHR134
AGLY135
AGLY136
ASER137

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 202
ChainResidue
AGLU52
APHE55
AVAL58
AILE60
AEDO203

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 203
ChainResidue
ALYS59
AILE60
ALEU81
AEDO202

site_idAC4
Number of Residues16
Detailsbinding site for residue IR9 B 201
ChainResidue
ASER22
BARG69
BASP129
BASP130
BILE131
BALA133
BTHR134
BGLY135
BGLY136
BSER137
BHOH313
BHOH318
BHOH319
BHOH321
BHOH337
BHOH354

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO B 202
ChainResidue
BPHE55
BPRO56
BVAL58
BILE60
BEDO203

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO B 203
ChainResidue
BVAL58
BLYS59
BILE60
BLEU81
BVAL83
BEDO202

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO B 204
ChainResidue
BPHE55
BGLU154
BPRO173

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO B 205
ChainResidue
AGLN115
AALA118
BLEU31
BARG35

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO B 206
ChainResidue
APRO32
AARG35
BGLN115
BALA118

site_idAD1
Number of Residues9
Detailsbinding site for residue ADE B 207
ChainResidue
BLEU26
BPHE27
BGLU28
BARG69
BILE131
BALA133
BLEU161
BHOH333
BHOH365

Functional Information from PROSITE/UniProt
site_idPS00103
Number of Residues13
DetailsPUR_PYR_PR_TRANSFER Purine/pyrimidine phosphoribosyl transferases signature. VIIVDDIIATGgS
ChainResidueDetails
AVAL125-SER137

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
AALA133
BALA133

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
ASER68
BSER68

223166

PDB entries from 2024-07-31

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