5V92
Pekin duck egg lysozyme isoform III (DEL-III), orthorhombic form
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003796 | molecular_function | lysozyme activity |
A | 0003824 | molecular_function | catalytic activity |
A | 0005576 | cellular_component | extracellular region |
A | 0008152 | biological_process | metabolic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0031640 | biological_process | killing of cells of another organism |
A | 0042742 | biological_process | defense response to bacterium |
A | 0050829 | biological_process | defense response to Gram-negative bacterium |
A | 0050830 | biological_process | defense response to Gram-positive bacterium |
B | 0003796 | molecular_function | lysozyme activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0005576 | cellular_component | extracellular region |
B | 0008152 | biological_process | metabolic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0031640 | biological_process | killing of cells of another organism |
B | 0042742 | biological_process | defense response to bacterium |
B | 0050829 | biological_process | defense response to Gram-negative bacterium |
B | 0050830 | biological_process | defense response to Gram-positive bacterium |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 2 |
Details | binding site for residue PO4 A 201 |
Chain | Residue |
A | ARG79 |
A | SER81 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue PO4 A 202 |
Chain | Residue |
A | ARG14 |
A | TYR34 |
A | ARG114 |
A | HOH344 |
A | HOH380 |
site_id | AC3 |
Number of Residues | 9 |
Details | binding site for residue PO4 B 201 |
Chain | Residue |
B | CYS127 |
B | ARG128 |
B | HOH313 |
B | HOH318 |
B | HOH326 |
B | HOH401 |
B | HOH457 |
B | ARG125 |
B | GLY126 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue PO4 B 202 |
Chain | Residue |
B | ARG85 |
B | SER86 |
B | HOH381 |
site_id | AC5 |
Number of Residues | 13 |
Details | binding site for residues PO4 B 203 and TRS B 204 |
Chain | Residue |
A | ARG112 |
A | ARG116 |
B | GLY22 |
B | TYR23 |
B | SER24 |
B | ASN27 |
B | VAL120 |
B | HOH301 |
B | HOH302 |
B | HOH303 |
B | HOH342 |
B | HOH357 |
B | HOH376 |
site_id | AC6 |
Number of Residues | 13 |
Details | binding site for residues PO4 B 203 and TRS B 204 |
Chain | Residue |
A | ARG112 |
A | ARG116 |
B | GLY22 |
B | TYR23 |
B | SER24 |
B | ASN27 |
B | VAL120 |
B | HOH301 |
B | HOH302 |
B | HOH303 |
B | HOH342 |
B | HOH357 |
B | HOH376 |
site_id | AC7 |
Number of Residues | 13 |
Details | binding site for residues PO4 B 203 and TRS B 204 |
Chain | Residue |
A | ARG112 |
A | ARG116 |
B | GLY22 |
B | TYR23 |
B | SER24 |
B | ASN27 |
B | VAL120 |
B | HOH301 |
B | HOH302 |
B | HOH303 |
B | HOH342 |
B | HOH357 |
B | HOH376 |
site_id | AC8 |
Number of Residues | 13 |
Details | binding site for residues PO4 B 203 and TRS B 204 |
Chain | Residue |
A | ARG112 |
A | ARG116 |
B | GLY22 |
B | TYR23 |
B | SER24 |
B | ASN27 |
B | VAL120 |
B | HOH301 |
B | HOH302 |
B | HOH303 |
B | HOH342 |
B | HOH357 |
B | HOH376 |
Functional Information from PROSITE/UniProt
site_id | PS00128 |
Number of Residues | 19 |
Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CgirCsvLlrsDIteavrC |
Chain | Residue | Details |
A | CYS76-CYS94 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU00680 |
Chain | Residue | Details |
A | GLU35 | |
A | ASP52 | |
B | GLU35 | |
B | ASP52 |