5UMF
Crystal Structure of a Ribulose-phosphate 3-epimerase from Neisseria gonorrhoeae with bound phosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
A | 0005829 | cellular_component | cytosol |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006098 | biological_process | pentose-phosphate shunt |
A | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
A | 0016853 | molecular_function | isomerase activity |
A | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
A | 0019323 | biological_process | pentose catabolic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
B | 0005829 | cellular_component | cytosol |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006098 | biological_process | pentose-phosphate shunt |
B | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
B | 0016853 | molecular_function | isomerase activity |
B | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
B | 0019323 | biological_process | pentose catabolic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
C | 0005829 | cellular_component | cytosol |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0006098 | biological_process | pentose-phosphate shunt |
C | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
C | 0016853 | molecular_function | isomerase activity |
C | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
C | 0019323 | biological_process | pentose catabolic process |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 301 |
Chain | Residue |
A | HIS34 |
A | ASP36 |
A | HIS67 |
A | ASP180 |
site_id | AC2 |
Number of Residues | 12 |
Details | binding site for residue PO4 A 302 |
Chain | Residue |
A | SER203 |
A | HOH402 |
A | HOH420 |
A | HOH424 |
A | HOH438 |
A | HOH443 |
A | HOH446 |
A | GLY145 |
A | GLY146 |
A | GLY182 |
A | ALA201 |
A | GLY202 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue GOL A 303 |
Chain | Residue |
A | ASN24 |
A | HOH555 |
A | HOH567 |
C | ASP107 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue ZN B 301 |
Chain | Residue |
B | HIS34 |
B | ASP36 |
B | HIS67 |
B | ASP180 |
site_id | AC5 |
Number of Residues | 11 |
Details | binding site for residue PO4 B 302 |
Chain | Residue |
B | GLY146 |
B | GLY182 |
B | ALA201 |
B | GLY202 |
B | SER203 |
B | HOH427 |
B | HOH429 |
B | HOH435 |
B | HOH442 |
B | HOH470 |
B | HOH495 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue GOL B 303 |
Chain | Residue |
B | ASN24 |
B | PRO209 |
B | ASP210 |
B | TYR211 |
B | LYS212 |
B | HOH471 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue GOL B 304 |
Chain | Residue |
A | ASP107 |
B | ALA23 |
B | ASN24 |
B | HOH428 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue ZN C 301 |
Chain | Residue |
C | HIS34 |
C | ASP36 |
C | HIS67 |
C | ASP180 |
site_id | AC9 |
Number of Residues | 13 |
Details | binding site for residue PO4 C 302 |
Chain | Residue |
C | GLY145 |
C | GLY146 |
C | GLY182 |
C | ALA201 |
C | GLY202 |
C | SER203 |
C | HOH411 |
C | HOH430 |
C | HOH435 |
C | HOH439 |
C | HOH441 |
C | HOH449 |
C | HOH482 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue GOL C 303 |
Chain | Residue |
B | ASP107 |
B | MET108 |
C | ASN24 |
C | HOH452 |
Functional Information from PROSITE/UniProt
site_id | PS01085 |
Number of Residues | 15 |
Details | RIBUL_P_3_EPIMER_1 Ribulose-phosphate 3-epimerase family signature 1. IHFDVmDnhYVpNlT |
Chain | Residue | Details |
A | ILE33-THR47 |
site_id | PS01086 |
Number of Residues | 23 |
Details | RIBUL_P_3_EPIMER_2 Ribulose-phosphate 3-epimerase family signature 2. VlLMSVnPgfgGQsFiphtleKI |
Chain | Residue | Details |
A | VAL135-ILE157 |