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5UL3

Structure of Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB with aqua-cobalamin bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0031419molecular_functioncobalamin binding
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SF4 A 801
ChainResidue
ACYS313
ASER316
ACYS318
ACYS321
AARG399
ADTT803

site_idAC2
Number of Residues42
Detailsbinding site for residue B12 A 802
ChainResidue
AGLN161
AGLY182
ALEU183
ASER184
APHE187
AGLY216
AASN217
ACYS237
ALYS239
AGLU240
AGLY241
AGLU242
AGLU308
AARG311
ACYS321
APRO322
AHIS325
ALYS326
AALA361
AGLU363
AGLU545
ADTT803
AEDO821
AHOH904
AHOH924
AHOH987
AHOH1001
AHOH1009
AHOH1032
AHOH1036
AHOH1064
AHOH1088
AHOH1142
AHOH1226
AHOH1267
AHOH1326
AHOH1331
AHOH1396
AHOH1420
APHE131
AARG135
ASER139

site_idAC3
Number of Residues7
Detailsbinding site for residue DTT A 803
ChainResidue
AGLU363
AALA397
ASF4801
AB12802
AHOH1031
AHOH1064
AHOH1126

site_idAC4
Number of Residues10
Detailsbinding site for residue MES A 804
ChainResidue
ATRP88
AHIS89
ASER107
ACYS108
AASP314
AARG317
AGLU368
APRO370
AHOH914
AHOH1321

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 805
ChainResidue
AASN468
ALEU469
AHOH948
AHOH1181

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO A 806
ChainResidue
ALEU469
AARG470
AVAL537
AHOH942
AHOH969

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO A 807
ChainResidue
AMET475
ALEU493
ATYR534
AMET540
ALEU541
AHIS638
AHOH1055

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 808
ChainResidue
ATYR539
AMET540
AILE601
AEDO828
AHOH1078
AHOH1191

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 809
ChainResidue
AVAL617
ATHR714
AASP715
AHOH1034

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 810
ChainResidue
AASP703
AALA706
AASP707
ALYS710

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 811
ChainResidue
AHOH922
AHOH1204
ALYS257
ALEU258
AASP259
AGLU269

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 812
ChainResidue
AASP259
AASN276
AHOH1253

site_idAD4
Number of Residues2
Detailsbinding site for residue EDO A 813
ChainResidue
AGLU150
AHOH1344

site_idAD5
Number of Residues2
Detailsbinding site for residue EDO A 814
ChainResidue
APRO75
AHOH1063

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO A 815
ChainResidue
ATHR373
AGLN376
AARG377
AASP380

site_idAD7
Number of Residues7
Detailsbinding site for residue EDO A 816
ChainResidue
ASER6
ASER9
AGLU44
ALYS588
ATHR589
AGLY681
AHOH1358

site_idAD8
Number of Residues2
Detailsbinding site for residue EDO A 817
ChainResidue
AMET251
AASN619

site_idAD9
Number of Residues4
Detailsbinding site for residue EDO A 818
ChainResidue
ALEU327
AARG328
ASER329
AHOH932

site_idAE1
Number of Residues4
Detailsbinding site for residue EDO A 819
ChainResidue
ATYR627
AARG634
AHOH1046
AHOH1163

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO A 820
ChainResidue
ATYR201
AARG230
ATYR231
APRO232
ASER233

site_idAE3
Number of Residues5
Detailsbinding site for residue EDO A 821
ChainResidue
AARG135
ATYR359
AB12802
AHOH1058
AHOH1170

site_idAE4
Number of Residues5
Detailsbinding site for residue EDO A 822
ChainResidue
AILE24
AASP344
AARG347
AHOH901
AHOH1167

site_idAE5
Number of Residues4
Detailsbinding site for residue EDO A 823
ChainResidue
APHE432
AGLU436
AGLY472
AHOH1126

site_idAE6
Number of Residues4
Detailsbinding site for residue EDO A 824
ChainResidue
AGLU545
AHOH924
AHOH1061
AHOH1382

site_idAE7
Number of Residues6
Detailsbinding site for residue EDO A 825
ChainResidue
AGLU94
AILE95
AGLU96
ALYS239
AASP324
AEDO826

site_idAE8
Number of Residues6
Detailsbinding site for residue EDO A 826
ChainResidue
ASER221
APHE222
AASP238
AASP324
AEDO825
AHOH977

site_idAE9
Number of Residues4
Detailsbinding site for residue EDO A 827
ChainResidue
AHIS665
ALYS699
ALEU700
AASP703

site_idAF1
Number of Residues6
Detailsbinding site for residue EDO A 828
ChainResidue
ASER538
AMET540
AARG634
AEDO808
AHOH1078
AHOH1176

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PDB entries from 2024-07-17

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