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5U5T

Crystal structure of EED in complex with H3K27Me3 peptide and 3-(benzo[d][1,3]dioxol-4-ylmethyl)piperidine-1-carboximidamide

Functional Information from GO Data
ChainGOidnamespacecontents
C0046976molecular_functionhistone H3K27 methyltransferase activity
D0046976molecular_functionhistone H3K27 methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue 7W7 A 501
ChainResidue
APHE97
AHOH612
AHOH692
AHOH731
ATYR148
AASN194
AGLU238
AASP310
ATYR365
AMET366
AARG367
AARG414

site_idAC2
Number of Residues3
Detailsbinding site for residue YT3 B 501
ChainResidue
BARG269
BLYS293
BHIS295

site_idAC3
Number of Residues2
Detailsbinding site for residue YT3 B 502
ChainResidue
AARG269
ALYS293

site_idAC4
Number of Residues11
Detailsbinding site for residue 7W7 B 503
ChainResidue
BPHE97
BTYR148
BASN194
BGLU238
BASP310
BTYR365
BMET366
BARG367
BARG414
BHOH673
BHOH742

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LLSVskDhALRLWNI
ChainResidueDetails
ALEU206-ILE220

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues86
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues86
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues80
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues82
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues74
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"20974918","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

248636

PDB entries from 2026-02-04

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