5U0T
Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with (1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0008757 | molecular_function | S-adenosylmethionine-dependent methyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0032259 | biological_process | methylation |
| A | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 23 |
| Details | binding site for residue SAH A 401 |
| Chain | Residue |
| A | GLY131 |
| A | MET180 |
| A | ASN194 |
| A | PRO196 |
| A | LEU207 |
| A | LEU208 |
| A | ILE214 |
| A | 7QM402 |
| A | HOH513 |
| A | HOH527 |
| A | HOH542 |
| A | CYS132 |
| A | HOH558 |
| A | HOH569 |
| A | HOH591 |
| A | HOH613 |
| A | GLY133 |
| A | VAL136 |
| A | LEU137 |
| A | ASP152 |
| A | VAL153 |
| A | GLY178 |
| A | ASP179 |
| site_id | AC2 |
| Number of Residues | 21 |
| Details | binding site for residue 7QM A 402 |
| Chain | Residue |
| A | ASP95 |
| A | VAL96 |
| A | GLU98 |
| A | ASP107 |
| A | TRP110 |
| A | GLU111 |
| A | ASN194 |
| A | SER195 |
| A | PRO196 |
| A | ASN198 |
| A | LEU208 |
| A | GLU209 |
| A | ASN235 |
| A | ARG281 |
| A | SAH401 |
| A | HOH531 |
| A | HOH554 |
| A | HOH565 |
| A | HOH582 |
| A | HOH588 |
| A | HOH603 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 403 |
| Chain | Residue |
| A | GLU98 |
| A | ASP206 |
| A | HOH512 |
| A | HOH556 |
| A | HOH573 |
| A | HOH609 |
