Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TYY

DNA Polymerase Mu Product Complex, Mn2+ (60 min)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 501
ChainResidue
AASP330
AASP332
AMN502
APPV507
AHOH722
PDT5

site_idAC2
Number of Residues7
Detailsbinding site for residue MN A 502
ChainResidue
AMN501
PDA4
PDT5
PHOH204
AASP330
AASP332
AASP418

site_idAC3
Number of Residues2
Detailsbinding site for residue MN A 503
ChainResidue
AGLU218
AHIS219

site_idAC4
Number of Residues4
Detailsbinding site for residue MN A 504
ChainResidue
AHIS208
AHOH839
DDG1
DHOH117

site_idAC5
Number of Residues5
Detailsbinding site for residue MN A 505
ChainResidue
AGLU386
AHIS459
AHOH799
AHOH848
THOH201

site_idAC6
Number of Residues6
Detailsbinding site for residue NA A 506
ChainResidue
ATHR241
AILE243
AVAL246
AHOH827
PDT3
PHOH215

site_idAC7
Number of Residues18
Detailsbinding site for residue PPV A 507
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AMN501
AHOH601
AHOH602
AHOH661
AHOH716
AHOH722
AHOH760
AHOH797
PDT5
PMN101

site_idAC8
Number of Residues2
Detailsbinding site for residue DTT A 508
ChainResidue
ACYS180
AHOH812

site_idAC9
Number of Residues4
Detailsbinding site for residue EPE A 509
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH663

site_idAD1
Number of Residues3
Detailsbinding site for residue MN T 101
ChainResidue
TDG2
THOH202
THOH227

site_idAD2
Number of Residues6
Detailsbinding site for residue MN P 101
ChainResidue
APPV507
AHOH601
AHOH760
AHOH797
PDT5
PHOH214

site_idAD3
Number of Residues7
Detailsbinding site for residue EDO P 102
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
PDA4
PDT5
PHOH206

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AALA430

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AARG445

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon