5TL4
Crystal structure of Sphingomonas paucimobilis aryl O-demethylase LigM
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0032259 | biological_process | methylation |
| A | 0046274 | biological_process | lignin catabolic process |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0032259 | biological_process | methylation |
| B | 0046274 | biological_process | lignin catabolic process |
| C | 0008168 | molecular_function | methyltransferase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0032259 | biological_process | methylation |
| C | 0046274 | biological_process | lignin catabolic process |
| D | 0008168 | molecular_function | methyltransferase activity |
| D | 0016740 | molecular_function | transferase activity |
| D | 0032259 | biological_process | methylation |
| D | 0046274 | biological_process | lignin catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 501 |
| Chain | Residue |
| A | MET61 |
| A | ARG122 |
| A | HOH611 |
| A | HOH731 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | binding site for residue NA A 502 |
| Chain | Residue |
| A | ASN81 |
| A | LYS92 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue NH4 A 503 |
| Chain | Residue |
| A | HOH1025 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 504 |
| Chain | Residue |
| A | HOH617 |
| A | HOH651 |
| A | HOH809 |
| A | HOH953 |
| A | HOH1039 |
| A | SER291 |
| A | VAL293 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue CL B 501 |
| Chain | Residue |
| B | MET61 |
| B | ARG122 |
| B | HOH607 |
| B | HOH615 |
| B | HOH998 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue GOL B 502 |
| Chain | Residue |
| B | SER291 |
| B | PHE292 |
| B | VAL293 |
| B | HOH601 |
| B | HOH747 |
| B | HOH844 |
| B | HOH935 |
| B | HOH974 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue CL C 501 |
| Chain | Residue |
| C | MET61 |
| C | ARG122 |
| C | HOH611 |
| C | HOH691 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue CL C 502 |
| Chain | Residue |
| C | ASN81 |
| C | LYS92 |
| C | HOH1263 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue NA C 503 |
| Chain | Residue |
| C | HOH882 |
| site_id | AD1 |
| Number of Residues | 8 |
| Details | binding site for residue GOL C 504 |
| Chain | Residue |
| C | SER291 |
| C | PHE292 |
| C | VAL293 |
| C | HOH607 |
| C | HOH695 |
| C | HOH827 |
| C | HOH911 |
| C | HOH1005 |
| site_id | AD2 |
| Number of Residues | 4 |
| Details | binding site for residue CL D 501 |
| Chain | Residue |
| D | MET61 |
| D | ARG122 |
| D | HOH646 |
| D | HOH711 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue NA D 502 |
| Chain | Residue |
| D | GLU19 |
| D | ARG22 |
| D | HOH997 |
| D | HOH1016 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue NA D 503 |
| Chain | Residue |
| D | ASN81 |
| D | LYS92 |
| D | HOH795 |
| site_id | AD5 |
| Number of Residues | 8 |
| Details | binding site for residue GOL D 504 |
| Chain | Residue |
| D | SER291 |
| D | PHE292 |
| D | VAL293 |
| D | HOH614 |
| D | HOH642 |
| D | HOH774 |
| D | HOH896 |
| D | HOH1002 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 48 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for activity","evidences":[{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for activity","evidences":[{"source":"PubMed","id":"28373573","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"28429420","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
