5TDW

Set3 PHD finger in complex with histone H3K4me3

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Functional Information from GO Data

ChainGOidnamespacecontents
B0070062cellular_componentextracellular exosome
B0005576cellular_componentextracellular region
B0016020cellular_componentmembrane
B0000228cellular_componentnuclear chromosome
B0000788cellular_componentnuclear nucleosome
B0005654cellular_componentnucleoplasm
B0000786cellular_componentnucleosome
B0005634cellular_componentnucleus
B0032991cellular_componentprotein-containing complex
B0045296molecular_functioncadherin binding
B0031492molecular_functionnucleosomal DNA binding
B0046982molecular_functionprotein heterodimerization activity
B0007596biological_processblood coagulation
B0044267biological_processcellular protein metabolic process
B0006325biological_processchromatin organization
B0000183biological_processchromatin silencing at rDNA
B0006335biological_processDNA replication-dependent nucleosome assembly
B0038111biological_processinterleukin-7-mediated signaling pathway
B0045814biological_processnegative regulation of gene expression, epigenetic
B0006334biological_processnucleosome assembly
B0051290biological_processprotein heterotetramerization
B0060968biological_processregulation of gene silencing
B0060964biological_processregulation of gene silencing by miRNA
B0045652biological_processregulation of megakaryocyte differentiation
B0032200biological_processtelomere organization
A0070210cellular_componentRpd3L-Expanded complex
A0034967cellular_componentSet3 complex
A0046872molecular_functionmetal ion binding
A0035064molecular_functionmethylated histone binding
A0016575biological_processhistone deacetylation
A0051321biological_processmeiotic cell cycle
A0045835biological_processnegative regulation of meiotic nuclear division
A0006355biological_processregulation of transcription, DNA-templated
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
AC14binding site for residue ZN A 101
ChainResidue
ACYS5
ACYS7
AHIS27
ACYS30

AC24binding site for residue ZN A 102
ChainResidue
ACYS19
ACYS22
ACYS45
ACYS48

AC35binding site for residue NA A 103
ChainResidue
ALEU44
ACYS45
AASP49
AARG51
AHOH260

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
M3L_5tdw_B_411N-TRIMETHYLLYSINE binding site
ChainResidueligand
AGLY1M3L: N-TRIMETHYLLYSINE
AILE3M3L: N-TRIMETHYLLYSINE
AASP12M3L: N-TRIMETHYLLYSINE
AGLY14-THR16M3L: N-TRIMETHYLLYSINE
ATRP25M3L: N-TRIMETHYLLYSINE
BARG2-THR3M3L: N-TRIMETHYLLYSINE
BGLN5-THR6M3L: N-TRIMETHYLLYSINE

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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
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Catalytic Information from CSA

site_idNumber of ResiduesDetails