5TD3
Crystal structure of Catechol 1,2-dioxygenase from Burkholderia vietnamiensis
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0008199 | molecular_function | ferric iron binding |
| A | 0009712 | biological_process | catechol-containing compound metabolic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| A | 0018576 | molecular_function | catechol 1,2-dioxygenase activity |
| A | 0019614 | biological_process | catechol-containing compound catabolic process |
| A | 0042952 | biological_process | beta-ketoadipate pathway |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051213 | molecular_function | dioxygenase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0008199 | molecular_function | ferric iron binding |
| B | 0009712 | biological_process | catechol-containing compound metabolic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| B | 0018576 | molecular_function | catechol 1,2-dioxygenase activity |
| B | 0019614 | biological_process | catechol-containing compound catabolic process |
| B | 0042952 | biological_process | beta-ketoadipate pathway |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051213 | molecular_function | dioxygenase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue ZN A 401 |
| Chain | Residue |
| A | TYR175 |
| A | HIS235 |
| A | HIS237 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 402 |
| Chain | Residue |
| A | HOH706 |
| A | HOH785 |
| A | HOH862 |
| B | HOH576 |
| B | HOH746 |
| B | HOH787 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 403 |
| Chain | Residue |
| A | HOH593 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue CL A 404 |
| Chain | Residue |
| A | ARG128 |
| B | ARG128 |
| B | LYS133 |
| B | HOH521 |
| B | HOH704 |
| site_id | AC5 |
| Number of Residues | 23 |
| Details | binding site for residue PTY A 405 |
| Chain | Residue |
| A | GLU65 |
| A | ALA68 |
| A | VAL70 |
| A | TYR72 |
| A | LEU76 |
| A | ALA82 |
| A | LEU85 |
| A | ALA86 |
| A | LEU91 |
| A | GLN221 |
| A | LEU222 |
| A | ARG225 |
| A | HOH547 |
| A | HOH559 |
| B | THR41 |
| B | ILE44 |
| B | LEU48 |
| B | LEU49 |
| B | LEU73 |
| B | LEU91 |
| B | PRO316 |
| B | PTY401 |
| B | HOH524 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue EDO A 406 |
| Chain | Residue |
| A | THR241 |
| A | SER242 |
| A | HIS245 |
| A | ARG246 |
| A | LYS247 |
| A | ARG304 |
| A | ASP309 |
| A | HOH639 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 407 |
| Chain | Residue |
| A | PRO215 |
| A | GLN216 |
| A | HOH798 |
| B | HOH669 |
| site_id | AC8 |
| Number of Residues | 14 |
| Details | binding site for residue PTY B 401 |
| Chain | Residue |
| A | THR41 |
| A | LEU48 |
| A | LEU49 |
| A | ASP51 |
| A | LEU52 |
| A | PTY405 |
| B | LEU48 |
| B | ASP51 |
| B | GLU65 |
| B | LEU73 |
| B | GLN221 |
| B | ARG225 |
| B | HOH583 |
| B | HOH602 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue ZN B 402 |
| Chain | Residue |
| B | TYR175 |
| B | HIS235 |
| B | HIS237 |
Functional Information from PROSITE/UniProt
| site_id | PS00083 |
| Number of Residues | 29 |
| Details | INTRADIOL_DIOXYGENAS Intradiol ring-cleavage dioxygenases signature. IhGtVkdldGkpVagalVECwhanshGfY |
| Chain | Residue | Details |
| A | ILE147-TYR175 |
