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5T7H

Crystal structure of dimeric yeast iso-1-cytochrome C with CYMAL6

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005739cellular_componentmitochondrion
A0005758cellular_componentmitochondrial intermembrane space
A0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
A0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A1901612molecular_functioncardiolipin binding
B0005515molecular_functionprotein binding
B0005739cellular_componentmitochondrion
B0005758cellular_componentmitochondrial intermembrane space
B0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
B0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B1901612molecular_functioncardiolipin binding
C0005515molecular_functionprotein binding
C0005739cellular_componentmitochondrion
C0005758cellular_componentmitochondrial intermembrane space
C0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
C0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
C0009055molecular_functionelectron transfer activity
C0020037molecular_functionheme binding
C0046872molecular_functionmetal ion binding
C1901612molecular_functioncardiolipin binding
D0005515molecular_functionprotein binding
D0005739cellular_componentmitochondrion
D0005758cellular_componentmitochondrial intermembrane space
D0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
D0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
D0009055molecular_functionelectron transfer activity
D0020037molecular_functionheme binding
D0046872molecular_functionmetal ion binding
D1901612molecular_functioncardiolipin binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue SO4 A 201
ChainResidue
ASER47
CHOH315
ATYR48
AASN52
AHOH309
AHOH314
AHOH340
CSER2
CALA3
CLYS4

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 202
ChainResidue
APRO76
AGLY77
ATHR78
ALYS79
AMET80

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 203
ChainResidue
ALYS86
ALYS87
AGLU88

site_idAC4
Number of Residues2
Detailsbinding site for residue ZE7 A 204
ChainResidue
ALYS55
ATYR74

site_idAC5
Number of Residues9
Detailsbinding site for residue SO4 B 201
ChainResidue
BSER2
BALA3
BLYS4
BHOH326
DSER47
DTYR48
DASN52
DHOH313
DHOH317

site_idAC6
Number of Residues10
Detailsbinding site for residue SO4 B 202
ChainResidue
BSER47
BTYR48
BASN52
BHOH310
BHOH328
BHOH341
DSER2
DALA3
DLYS4
DHOH331

site_idAC7
Number of Residues7
Detailsbinding site for residue SO4 B 203
ChainResidue
BPRO76
BGLY77
BTHR78
BLYS79
BMET80
BLYS86
BHOH346

site_idAC8
Number of Residues2
Detailsbinding site for residue ZE7 B 204
ChainResidue
BTYR67
BTYR74

site_idAC9
Number of Residues10
Detailsbinding site for residue SO4 C 201
ChainResidue
ASER2
AALA3
ALYS4
CSER47
CTYR48
CASN52
CHOH306
CHOH318
CHOH333
CHOH339

site_idAD1
Number of Residues7
Detailsbinding site for residue SO4 C 202
ChainResidue
CPRO76
CGLY77
CTHR78
CLYS79
CMET80
CHOH309
CHOH320

site_idAD2
Number of Residues7
Detailsbinding site for residue ZE7 C 203
ChainResidue
CSER40
CTYR48
CLYS55
CTRP59
CASN63
CTYR67
CTYR74

site_idAD3
Number of Residues6
Detailsbinding site for residue SO4 D 201
ChainResidue
DGLY77
DTHR78
DLYS79
DMET80
DHOH302
DHOH342

site_idAD4
Number of Residues3
Detailsbinding site for residue ZE7 D 202
ChainResidue
DTRP59
DTYR67
DTYR74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBinding site: {"description":"covalent","evidences":[{"source":"PubMed","id":"11880631","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18390544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KYO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3CX5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"description":"axial binding residue","evidences":[{"source":"PubMed","id":"11880631","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18390544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KYO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3CX5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsModified residue: {"description":"N6,N6,N6-trimethyllysine; by CTM1","evidences":[{"source":"PubMed","id":"10791961","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11880631","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KYO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"N6,N6,N6-trimethyllysine","evidences":[{"source":"PubMed","id":"10821864","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18390544","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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