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5T4M

Crystal Structure of Human Protocadherin-15 EC3-5

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0005886cellular_componentplasma membrane
A0007155biological_processcell adhesion
A0007156biological_processhomophilic cell-cell adhesion
A0016020cellular_componentmembrane
B0005509molecular_functioncalcium ion binding
B0005886cellular_componentplasma membrane
B0007155biological_processcell adhesion
B0007156biological_processhomophilic cell-cell adhesion
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue CA A 701
ChainResidue
AGLU367
AASN369
AASP411
AHOH855
AHOH892
AHOH902
AHOH909

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 702
ChainResidue
AASP409
AASP411
AASP464
AHOH900
AASN368
AGLN370

site_idAC3
Number of Residues7
Detailsbinding site for residue CA A 703
ChainResidue
AGLU385
AASP449
AGLU451
AASP483
ACA704
AHOH834
AHOH886

site_idAC4
Number of Residues7
Detailsbinding site for residue CA A 704
ChainResidue
AGLU385
AGLU451
AASP480
AALA481
AASP483
AASP516
ACA703

site_idAC5
Number of Residues6
Detailsbinding site for residue CA A 705
ChainResidue
AASN482
AASN484
AASP514
AASP516
AASN520
AASP566

site_idAC6
Number of Residues7
Detailsbinding site for residue CA B 701
ChainResidue
BGLU385
BGLU451
BASP480
BALA481
BASP483
BASP516
BCA703

site_idAC7
Number of Residues6
Detailsbinding site for residue CA B 702
ChainResidue
BASN482
BASN484
BASP514
BASP516
BASN520
BASP566

site_idAC8
Number of Residues7
Detailsbinding site for residue CA B 703
ChainResidue
BGLU385
BASP449
BGLU451
BASP483
BCA701
BHOH865
BHOH907

site_idAC9
Number of Residues6
Detailsbinding site for residue CA B 704
ChainResidue
BASN368
BGLN370
BASP409
BASP411
BASP464
BHOH917

site_idAD1
Number of Residues6
Detailsbinding site for residue CA B 705
ChainResidue
BASP366
BGLU367
BASN369
BASP411
BCL706
BHOH840

site_idAD2
Number of Residues3
Detailsbinding site for residue CL B 706
ChainResidue
BASP366
BASP411
BCA705

Functional Information from PROSITE/UniProt
site_idPS00232
Number of Residues11
DetailsCADHERIN_1 Cadherin domain signature. IqVmDaNDNtP
ChainResidueDetails
AILE476-PRO486

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues117
DetailsDomain: {"description":"Cadherin 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00043","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues226
DetailsDomain: {"description":"Cadherin 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00043","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues106
DetailsDomain: {"description":"Cadherin 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00043","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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