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5T3O

Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0002189cellular_componentribose phosphate diphosphokinase complex
A0004749molecular_functionribose phosphate diphosphokinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006015biological_process5-phosphoribose 1-diphosphate biosynthetic process
A0006164biological_processpurine nucleotide biosynthetic process
A0009156biological_processribonucleoside monophosphate biosynthetic process
A0009165biological_processnucleotide biosynthetic process
A0016301molecular_functionkinase activity
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0002189cellular_componentribose phosphate diphosphokinase complex
B0004749molecular_functionribose phosphate diphosphokinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006015biological_process5-phosphoribose 1-diphosphate biosynthetic process
B0006164biological_processpurine nucleotide biosynthetic process
B0009156biological_processribonucleoside monophosphate biosynthetic process
B0009165biological_processnucleotide biosynthetic process
B0016301molecular_functionkinase activity
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0002189cellular_componentribose phosphate diphosphokinase complex
C0004749molecular_functionribose phosphate diphosphokinase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006015biological_process5-phosphoribose 1-diphosphate biosynthetic process
C0006164biological_processpurine nucleotide biosynthetic process
C0009156biological_processribonucleoside monophosphate biosynthetic process
C0009165biological_processnucleotide biosynthetic process
C0016301molecular_functionkinase activity
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue ADP A 401
ChainResidue
ASER94
CASN38
CASN40
AARG97
ASER98
ALYS100
AASP102
AHIS131
AASP171
AARG196
CPHE36

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 A 402
ChainResidue
AARG105
ASER304
AVAL305
ASER306
CSER48
CARG50
CHOH519

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 403
ChainResidue
ASER224
ATHR225
AALA226
AGLY227
ASER228

site_idAC4
Number of Residues12
Detailsbinding site for residue ADP B 401
ChainResidue
BPHE36
BASN38
BASN40
BARG97
BSER98
BLYS100
BASP102
BHIS131
BASP171
BARG196
BHOH552
BHOH585

site_idAC5
Number of Residues8
Detailsbinding site for residue SO4 B 402
ChainResidue
ASER48
AARG50
BSER304
BVAL305
BSER306
BHOH529
BHOH575
CARG105

site_idAC6
Number of Residues9
Detailsbinding site for residue SO4 B 403
ChainResidue
BARG196
BSER224
BTHR225
BALA226
BGLY227
BSER228
BHOH515
BHOH556
BHOH567

site_idAC7
Number of Residues8
Detailsbinding site for residue ADP C 401
ChainResidue
APHE36
AASN38
AASN40
CARG97
CSER98
CLYS100
CASP102
CHIS131

site_idAC8
Number of Residues8
Detailsbinding site for residue SO4 C 402
ChainResidue
BSER48
BARG50
BARG105
BHOH524
CSER304
CVAL305
CSER306
CHOH540

site_idAC9
Number of Residues7
Detailsbinding site for residue SO4 C 403
ChainResidue
CSER224
CTHR225
CALA226
CGLY227
CSER228
CHOH520
CHOH529

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PDB entries from 2024-06-26

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