5SZS

Glycan shield and epitope masking of a coronavirus spike protein observed by cryo-electron microscopy

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003700	molecular_function	DNA-binding transcription factor activity
A	0006355	biological_process	regulation of DNA-templated transcription
A	0016020	cellular_component	membrane
A	0019031	cellular_component	viral envelope
A	0019064	biological_process	fusion of virus membrane with host plasma membrane
A	0039654	biological_process	fusion of virus membrane with host endosome membrane
A	0046813	biological_process	receptor-mediated virion attachment to host cell
A	0055036	cellular_component	virion membrane
A	0075509	biological_process	endocytosis involved in viral entry into host cell
B	0003700	molecular_function	DNA-binding transcription factor activity
B	0006355	biological_process	regulation of DNA-templated transcription
B	0016020	cellular_component	membrane
B	0019031	cellular_component	viral envelope
B	0019064	biological_process	fusion of virus membrane with host plasma membrane
B	0039654	biological_process	fusion of virus membrane with host endosome membrane
B	0046813	biological_process	receptor-mediated virion attachment to host cell
B	0055036	cellular_component	virion membrane
B	0075509	biological_process	endocytosis involved in viral entry into host cell
C	0003700	molecular_function	DNA-binding transcription factor activity
C	0006355	biological_process	regulation of DNA-templated transcription
C	0016020	cellular_component	membrane
C	0019031	cellular_component	viral envelope
C	0019064	biological_process	fusion of virus membrane with host plasma membrane
C	0039654	biological_process	fusion of virus membrane with host endosome membrane
C	0046813	biological_process	receptor-mediated virion attachment to host cell
C	0055036	cellular_component	virion membrane
C	0075509	biological_process	endocytosis involved in viral entry into host cell

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	90
Details	CARBOHYD: N-linked (GlcNAc) asparagine; by host => ECO:0000269|PubMed:27617430

Chain	Residue	Details
A	ASN35
A	ASN330
A	ASN354
A	ASN358
A	ASN403
A	ASN426
A	ASN506
A	ASN626
A	ASN645
A	ASN666
A	ASN699
A	ASN52
A	ASN723
A	ASN749
A	ASN762
A	ASN768
A	ASN1111
A	ASN1196
A	ASN1201
A	ASN1218
A	ASN1242
A	ASN1247
A	ASN98
A	ASN1277
B	ASN35
B	ASN52
B	ASN98
B	ASN155
B	ASN187
B	ASN193
B	ASN240
B	ASN276
B	ASN301
A	ASN155
B	ASN330
B	ASN354
B	ASN358
B	ASN403
B	ASN426
B	ASN506
B	ASN626
B	ASN645
B	ASN666
B	ASN699
A	ASN187
B	ASN723
B	ASN749
B	ASN762
B	ASN768
B	ASN1111
B	ASN1196
B	ASN1201
B	ASN1218
B	ASN1242
B	ASN1247
A	ASN193
B	ASN1277
C	ASN35
C	ASN52
C	ASN98
C	ASN155
C	ASN187
C	ASN193
C	ASN240
C	ASN276
C	ASN301
A	ASN240
C	ASN330
C	ASN354
C	ASN358
C	ASN403
C	ASN426
C	ASN506
C	ASN626
C	ASN645
C	ASN666
C	ASN699
A	ASN276
C	ASN723
C	ASN749
C	ASN762
C	ASN768
C	ASN1111
C	ASN1196
C	ASN1201
C	ASN1218
C	ASN1242
C	ASN1247
A	ASN301
C	ASN1277

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site_id	SWS_FT_FI2
Number of Residues	6
Details	CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:19901337, ECO:0000269|PubMed:27617430

Chain	Residue	Details
A	ASN486
A	ASN512
B	ASN486
B	ASN512
C	ASN486
C	ASN512

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