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5SYT

Crystal Structure of ZMPSTE24

Functional Information from GO Data
ChainGOidnamespacecontents
A0001889biological_processliver development
A0001942biological_processhair follicle development
A0003007biological_processheart morphogenesis
A0003229biological_processventricular cardiac muscle tissue development
A0003231biological_processcardiac ventricle development
A0003417biological_processgrowth plate cartilage development
A0003690molecular_functiondouble-stranded DNA binding
A0004175molecular_functionendopeptidase activity
A0004222molecular_functionmetalloendopeptidase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005635cellular_componentnuclear envelope
A0005637cellular_componentnuclear inner membrane
A0005768cellular_componentendosome
A0005783cellular_componentendoplasmic reticulum
A0005789cellular_componentendoplasmic reticulum membrane
A0006281biological_processDNA repair
A0006325biological_processchromatin organization
A0006355biological_processregulation of DNA-templated transcription
A0006508biological_processproteolysis
A0006925biological_processinflammatory cell apoptotic process
A0006974biological_processDNA damage response
A0006997biological_processnucleus organization
A0006998biological_processnuclear envelope organization
A0007346biological_processregulation of mitotic cell cycle
A0007628biological_processadult walking behavior
A0008016biological_processregulation of heart contraction
A0008233molecular_functionpeptidase activity
A0008235molecular_functionmetalloexopeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0008340biological_processdetermination of adult lifespan
A0008360biological_processregulation of cell shape
A0008544biological_processepidermis development
A0010506biological_processregulation of autophagy
A0010628biological_processpositive regulation of gene expression
A0010629biological_processnegative regulation of gene expression
A0010906biological_processregulation of glucose metabolic process
A0016020cellular_componentmembrane
A0016485biological_processprotein processing
A0019216biological_processregulation of lipid metabolic process
A0030282biological_processbone mineralization
A0030327biological_processprenylated protein catabolic process
A0030500biological_processregulation of bone mineralization
A0031901cellular_componentearly endosome membrane
A0031902cellular_componentlate endosome membrane
A0032006biological_processregulation of TOR signaling
A0032350biological_processregulation of hormone metabolic process
A0032991cellular_componentprotein-containing complex
A0035264biological_processmulticellular organism growth
A0040014biological_processregulation of multicellular organism growth
A0040029biological_processepigenetic regulation of gene expression
A0043007biological_processmaintenance of rDNA
A0043516biological_processregulation of DNA damage response, signal transduction by p53 class mediator
A0044029biological_processpositive regulation of gene expression via chromosomal CpG island demethylation
A0044255biological_processcellular lipid metabolic process
A0046872molecular_functionmetal ion binding
A0048145biological_processregulation of fibroblast proliferation
A0048538biological_processthymus development
A0050688biological_processregulation of defense response to virus
A0050905biological_processneuromuscular process
A0051276biological_processchromosome organization
A0051604biological_processprotein maturation
A0055013biological_processcardiac muscle cell development
A0060307biological_processregulation of ventricular cardiac muscle cell membrane repolarization
A0060993biological_processkidney morphogenesis
A0061337biological_processcardiac conduction
A0061762biological_processCAMKK-AMPK signaling cascade
A0070062cellular_componentextracellular exosome
A0070302biological_processregulation of stress-activated protein kinase signaling cascade
A0071480biological_processcellular response to gamma radiation
A0071586biological_processCAAX-box protein processing
A0072423biological_processresponse to DNA damage checkpoint signaling
A1903463biological_processregulation of mitotic cell cycle DNA replication
A1903522biological_processregulation of blood circulation
A1903799biological_processnegative regulation of miRNA processing
A1990036biological_processcalcium ion import into sarcoplasmic reticulum
A2000730biological_processregulation of termination of RNA polymerase I transcription
A2000772biological_processregulation of cellular senescence
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue SO4 A 501
ChainResidue
ALEU101
ALEU129
APHE133

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 502
ChainResidue
ASER81
ATYR84
ASER85
ATRP141
AHOH672

site_idAC3
Number of Residues12
Detailsbinding site for residue PC1 A 503
ChainResidue
ATHR35
AGLN39
AARG43
ATYR118
AGLU119
AILE120
ATHR121
ALEU179
APRO180
ASER183
ALYS190
ALEU32

site_idAC4
Number of Residues7
Detailsbinding site for residue CXE A 504
ChainResidue
ALEU127
AASN355
ASER356
ALEU389
APHE392
AGLN393
AASN400

site_idAC5
Number of Residues4
Detailsbinding site for residue C8E A 505
ChainResidue
ALEU209
AASN348
AILE349
APHE414

site_idAC6
Number of Residues4
Detailsbinding site for residue C8E A 506
ChainResidue
AALA135
ALEU139
AALA167
AC8E511

site_idAC7
Number of Residues1
Detailsbinding site for residue C8E A 507
ChainResidue
APRO140

site_idAC8
Number of Residues5
Detailsbinding site for residue C8E A 508
ChainResidue
AGLU86
ATHR87
ACYS176
AILE177
AVAL210

site_idAC9
Number of Residues1
Detailsbinding site for residue C8E A 509
ChainResidue
AGLY97

site_idAD1
Number of Residues7
Detailsbinding site for residue C8E A 510
ChainResidue
APHE26
ASER27
ASER85
AGLU86
AGLU88
ASER397
AHOH616

site_idAD2
Number of Residues10
Detailsbinding site for residue C8E A 511
ChainResidue
AALA135
AGLY138
ALEU139
ASER142
AGLN158
APHE163
AASP166
AARG260
AC8E506
AHOH684

site_idAD3
Number of Residues8
Detailsbinding site for residue C8E A 512
ChainResidue
ATRP80
ALEU83
AILE191
AGLY193
ATYR199
APHE203
AVAL206
AHOH632

site_idAD4
Number of Residues3
Detailsbinding site for residue C8E A 513
ChainResidue
AVAL23
AARG369
APRO398

site_idAD5
Number of Residues2
Detailsbinding site for residue C8E A 514
ChainResidue
AASP194
AGOL519

site_idAD6
Number of Residues1
Detailsbinding site for residue C8E A 515
ChainResidue
APHE95

site_idAD7
Number of Residues7
Detailsbinding site for residue C8E A 516
ChainResidue
AASP73
ATHR76
APHE77
APRO140
ATRP141
ATYR144
ALYS152

site_idAD8
Number of Residues5
Detailsbinding site for residue ZN A 517
ChainResidue
AHIS335
AGLU336
AHIS339
AGLU415
AHOH628

site_idAD9
Number of Residues6
Detailsbinding site for residue GOL A 518
ChainResidue
AILE189
ALYS190
AILE367
ATHR384
AHOH608
AHOH642

site_idAE1
Number of Residues4
Detailsbinding site for residue GOL A 519
ChainResidue
AVAL365
AARG369
AC8E514
AHOH605

site_idAE2
Number of Residues3
Detailsbinding site for residue PEG A 520
ChainResidue
AGLY21
ALEU25
ATYR218

site_idAE3
Number of Residues3
Detailsbinding site for residue DMS A 521
ChainResidue
APRO230
ATYR287
ATHR227

site_idAE4
Number of Residues1
Detailsbinding site for residue DMS A 522
ChainResidue
ALYS152

site_idAE5
Number of Residues3
Detailsbinding site for residue DMS A 523
ChainResidue
ATYR457
ASER458
AHIS459

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues53
DetailsTOPO_DOM: Lumenal => ECO:0000255
ChainResidueDetails
AARG103-SER123
AGLY192-TYR195
AARG369-GLN382
AMET1-ARG18

site_idSWS_FT_FI2
Number of Residues142
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AILE19-GLN39
AGLY82-TRP102
ALEU124-TYR144
APHE171-ILE191
APHE196-ALA216
AASN348-GLY368
APRO383-PHE405

site_idSWS_FT_FI3
Number of Residues196
DetailsTOPO_DOM: Nuclear => ECO:0000255
ChainResidueDetails
AARG40-SER81
AASN145-LYS170
AASP217-LYS347

site_idSWS_FT_FI4
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000269|PubMed:23539603
ChainResidueDetails
AGLU336

site_idSWS_FT_FI5
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:23539603
ChainResidueDetails
AHIS339
AGLU415
AHIS335

221051

PDB entries from 2024-06-12

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