5SYT
Crystal Structure of ZMPSTE24
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003690 | molecular_function | double-stranded DNA binding |
| A | 0004175 | molecular_function | endopeptidase activity |
| A | 0004222 | molecular_function | metalloendopeptidase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005635 | cellular_component | nuclear envelope |
| A | 0005637 | cellular_component | nuclear inner membrane |
| A | 0005789 | cellular_component | endoplasmic reticulum membrane |
| A | 0006508 | biological_process | proteolysis |
| A | 0006998 | biological_process | nuclear envelope organization |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008235 | molecular_function | metalloexopeptidase activity |
| A | 0008237 | molecular_function | metallopeptidase activity |
| A | 0016020 | cellular_component | membrane |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0031901 | cellular_component | early endosome membrane |
| A | 0031902 | cellular_component | late endosome membrane |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050688 | biological_process | regulation of defense response to virus |
| A | 0051604 | biological_process | protein maturation |
| A | 0070062 | cellular_component | extracellular exosome |
| A | 0071586 | biological_process | CAAX-box protein processing |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 501 |
| Chain | Residue |
| A | LEU101 |
| A | LEU129 |
| A | PHE133 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 502 |
| Chain | Residue |
| A | SER81 |
| A | TYR84 |
| A | SER85 |
| A | TRP141 |
| A | HOH672 |
| site_id | AC3 |
| Number of Residues | 12 |
| Details | binding site for residue PC1 A 503 |
| Chain | Residue |
| A | THR35 |
| A | GLN39 |
| A | ARG43 |
| A | TYR118 |
| A | GLU119 |
| A | ILE120 |
| A | THR121 |
| A | LEU179 |
| A | PRO180 |
| A | SER183 |
| A | LYS190 |
| A | LEU32 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue CXE A 504 |
| Chain | Residue |
| A | LEU127 |
| A | ASN355 |
| A | SER356 |
| A | LEU389 |
| A | PHE392 |
| A | GLN393 |
| A | ASN400 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue C8E A 505 |
| Chain | Residue |
| A | LEU209 |
| A | ASN348 |
| A | ILE349 |
| A | PHE414 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue C8E A 506 |
| Chain | Residue |
| A | ALA135 |
| A | LEU139 |
| A | ALA167 |
| A | C8E511 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | binding site for residue C8E A 507 |
| Chain | Residue |
| A | PRO140 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue C8E A 508 |
| Chain | Residue |
| A | GLU86 |
| A | THR87 |
| A | CYS176 |
| A | ILE177 |
| A | VAL210 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue C8E A 509 |
| Chain | Residue |
| A | GLY97 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue C8E A 510 |
| Chain | Residue |
| A | PHE26 |
| A | SER27 |
| A | SER85 |
| A | GLU86 |
| A | GLU88 |
| A | SER397 |
| A | HOH616 |
| site_id | AD2 |
| Number of Residues | 10 |
| Details | binding site for residue C8E A 511 |
| Chain | Residue |
| A | ALA135 |
| A | GLY138 |
| A | LEU139 |
| A | SER142 |
| A | GLN158 |
| A | PHE163 |
| A | ASP166 |
| A | ARG260 |
| A | C8E506 |
| A | HOH684 |
| site_id | AD3 |
| Number of Residues | 8 |
| Details | binding site for residue C8E A 512 |
| Chain | Residue |
| A | TRP80 |
| A | LEU83 |
| A | ILE191 |
| A | GLY193 |
| A | TYR199 |
| A | PHE203 |
| A | VAL206 |
| A | HOH632 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue C8E A 513 |
| Chain | Residue |
| A | VAL23 |
| A | ARG369 |
| A | PRO398 |
| site_id | AD5 |
| Number of Residues | 2 |
| Details | binding site for residue C8E A 514 |
| Chain | Residue |
| A | ASP194 |
| A | GOL519 |
| site_id | AD6 |
| Number of Residues | 1 |
| Details | binding site for residue C8E A 515 |
| Chain | Residue |
| A | PHE95 |
| site_id | AD7 |
| Number of Residues | 7 |
| Details | binding site for residue C8E A 516 |
| Chain | Residue |
| A | ASP73 |
| A | THR76 |
| A | PHE77 |
| A | PRO140 |
| A | TRP141 |
| A | TYR144 |
| A | LYS152 |
| site_id | AD8 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 517 |
| Chain | Residue |
| A | HIS335 |
| A | GLU336 |
| A | HIS339 |
| A | GLU415 |
| A | HOH628 |
| site_id | AD9 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 518 |
| Chain | Residue |
| A | ILE189 |
| A | LYS190 |
| A | ILE367 |
| A | THR384 |
| A | HOH608 |
| A | HOH642 |
| site_id | AE1 |
| Number of Residues | 4 |
| Details | binding site for residue GOL A 519 |
| Chain | Residue |
| A | VAL365 |
| A | ARG369 |
| A | C8E514 |
| A | HOH605 |
| site_id | AE2 |
| Number of Residues | 3 |
| Details | binding site for residue PEG A 520 |
| Chain | Residue |
| A | GLY21 |
| A | LEU25 |
| A | TYR218 |
| site_id | AE3 |
| Number of Residues | 3 |
| Details | binding site for residue DMS A 521 |
| Chain | Residue |
| A | PRO230 |
| A | TYR287 |
| A | THR227 |
| site_id | AE4 |
| Number of Residues | 1 |
| Details | binding site for residue DMS A 522 |
| Chain | Residue |
| A | LYS152 |
| site_id | AE5 |
| Number of Residues | 3 |
| Details | binding site for residue DMS A 523 |
| Chain | Residue |
| A | TYR457 |
| A | SER458 |
| A | HIS459 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 142 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 66 |
| Details | Topological domain: {"description":"Nuclear","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 36 |
| Details | Topological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"23539603","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23539603","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |






