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5SX1

Crystal structure of D141E variant of B. pseudomallei KatG

Replaces:  2DV1
Functional Information from GO Data
ChainGOidnamespacecontents
A0004096molecular_functioncatalase activity
A0004601molecular_functionperoxidase activity
A0005829cellular_componentcytosol
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0070301biological_processcellular response to hydrogen peroxide
A0098869biological_processcellular oxidant detoxification
B0004096molecular_functioncatalase activity
B0004601molecular_functionperoxidase activity
B0005829cellular_componentcytosol
B0006979biological_processresponse to oxidative stress
B0020037molecular_functionheme binding
B0042744biological_processhydrogen peroxide catabolic process
B0046872molecular_functionmetal ion binding
B0070301biological_processcellular response to hydrogen peroxide
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue HEM A 801
ChainResidue
AGLY104
AHIS285
ATHR323
ASER324
ATHR388
AOXY803
AOXY804
AHOH945
AHOH1068
AHOH1113
ALEU105
ATRP111
ALEU274
AGLY278
AHIS279
AGLY282
ALYS283
ATHR284

site_idAC2
Number of Residues6
Detailsbinding site for residue NA A 802
ChainResidue
AGLY122
AARG123
AGLY124
ASER494
AHOH962
AHOH980

site_idAC3
Number of Residues6
Detailsbinding site for residue OXY A 803
ChainResidue
AARG108
AHIS112
AGLU141
AHEM801
AOXY804
AHOH1061

site_idAC4
Number of Residues6
Detailsbinding site for residue OXY A 804
ChainResidue
ATRP111
AHIS112
AGLU141
AHEM801
AOXY803
AHOH940

site_idAC5
Number of Residues2
Detailsbinding site for residue MPD A 805
ChainResidue
ALEU209
ATHR323

site_idAC6
Number of Residues4
Detailsbinding site for residue MPD A 806
ChainResidue
AASP83
APRO154
AHOH1025
AHOH1073

site_idAC7
Number of Residues3
Detailsbinding site for residue PO4 A 807
ChainResidue
AHIS381
AARG382
AHOH1150

site_idAC8
Number of Residues21
Detailsbinding site for residue HEM B 801
ChainResidue
BGLY104
BLEU105
BTRP111
BLEU274
BILE275
BGLY278
BHIS279
BGLY282
BLYS283
BTHR284
BHIS285
BTHR323
BSER324
BTRP330
BTHR388
BTRP420
BOXY803
BOXY804
BHOH930
BHOH991
BHOH1053

site_idAC9
Number of Residues6
Detailsbinding site for residue NA B 802
ChainResidue
BGLY122
BARG123
BGLY124
BSER494
BHOH941
BHOH963

site_idAD1
Number of Residues6
Detailsbinding site for residue OXY B 803
ChainResidue
BARG108
BHIS112
BGLU141
BHEM801
BOXY804
BHOH932

site_idAD2
Number of Residues6
Detailsbinding site for residue OXY B 804
ChainResidue
BTRP111
BHIS112
BGLU141
BHEM801
BOXY803
BHOH913

site_idAD3
Number of Residues1
Detailsbinding site for residue MPD B 805
ChainResidue
BALA290

site_idAD4
Number of Residues4
Detailsbinding site for residue PO4 B 806
ChainResidue
BLYS380
BHIS381
BARG382
BHOH951

site_idAD5
Number of Residues5
Detailsbinding site for residue OXY B 807
ChainResidue
BGLU141
BILE237
BTYR238
BVAL239
BHOH913

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. TVALIAGGHTF
ChainResidueDetails
ATHR271-PHE281

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GGlfIRMaWHSA
ChainResidueDetails
AGLY103-ALA114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AHIS112
BHIS112

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AHIS279
BHIS279

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
AARG108
BARG108

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Trp-Tyr) (with M-244) => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
ATRP111
BTRP111

site_idSWS_FT_FI5
Number of Residues4
DetailsCROSSLNK: Tryptophyl-tyrosyl-methioninium (Tyr-Met) (with W-91) => ECO:0000255|HAMAP-Rule:MF_01961
ChainResidueDetails
ATYR238
AMET264
BTYR238
BMET264

224572

PDB entries from 2024-09-04

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