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5RGQ

PanDDA analysis group deposition SARS-CoV-2 main protease fragment screen -- Crystal Structure of SARS-CoV-2 main protease in complex with Z1849009686 (Mpro-x1086)

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0019082biological_processviral protein processing
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue DMS A 401
ChainResidue
AGLN74
AARG76
AARG222
ATHR224
AASP263
AHOH531
AHOH579

site_idAC2
Number of Residues3
Detailsbinding site for residue DMS A 402
ChainResidue
ALYS97
AGLY15
AMET17

site_idAC3
Number of Residues9
Detailsbinding site for residue U1V A 403
ChainResidue
AARG4
ALYS5
AMET6
APHE8
ASER123
AGLN127
APHE291
AASP295
AGLN299

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: For 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772, ECO:0000305|PubMed:32198291
ChainResidueDetails
AHIS41

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Nucleophile; for 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772, ECO:0000269|PubMed:32198291
ChainResidueDetails
ACYS145

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by 3CL-PRO => ECO:0000250|UniProtKB:P0C6V3
ChainResidueDetails
AGLN306

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PDB entries from 2024-07-24

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