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5REF

PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with Z24758179

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0019082biological_processviral protein processing
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue DMS A 401
ChainResidue
AARG76
AARG222
APHE223
ATHR224
AASP263
AHOH546
AHOH554

site_idAC2
Number of Residues5
Detailsbinding site for residue DMS A 402
ChainResidue
ASER123
AGLN127
AARG298
AMET6
APHE8

site_idAC3
Number of Residues4
Detailsbinding site for residue DMS A 403
ChainResidue
AGLY15
AMET17
ALYS97
AHOH598

site_idAC4
Number of Residues9
Detailsbinding site for residue 6SU A 404
ChainResidue
ASER46
ALEU50
AGLN189
AILE249
APRO252
ATHR292
APRO293
APHE294
AHOH798

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"For 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32198291","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Nucleophile; for 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32198291","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"39223933","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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