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5QSL

PanDDA analysis group deposition -- Crystal Structure of human Brachyury in complex with Z1273312153

Functional Information from GO Data
ChainGOidnamespacecontents
A0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
A0045893biological_processpositive regulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue CD A 301
ChainResidue
AGLU167
AGLU167
ACYS186
ACYS186
ACD302
ACD302
AHOH410
AHOH410

site_idAC2
Number of Residues6
Detailsbinding site for residue CD A 302
ChainResidue
ACYS186
ACD301
ACD301
AHOH449
AHOH457
AGLU167

site_idAC3
Number of Residues3
Detailsbinding site for residue CD A 303
ChainResidue
ACYS122
AHOH445
AHOH471

site_idAC4
Number of Residues5
Detailsbinding site for residue CD A 304
ChainResidue
ALEU91
AHIS100
AHOH453
AHOH454
AHOH462

site_idAC5
Number of Residues3
Detailsbinding site for residue CD A 305
ChainResidue
ACYS122
AHOH447
AHOH471

site_idAC6
Number of Residues2
Detailsbinding site for residue CD A 306
ChainResidue
AHIS135
ALYS138

site_idAC7
Number of Residues8
Detailsbinding site for residue O2A A 307
ChainResidue
APRO117
AGLN118
AALA119
APRO120
ASER121
AMET159
ALEU160
AASN161

Functional Information from PROSITE/UniProt
site_idPS01264
Number of Residues19
DetailsTBOX_2 T-box domain signature 2. IHPDSpnfGahWMkapVsF
ChainResidueDetails
AILE125-PHE143

site_idPS01283
Number of Residues20
DetailsTBOX_1 T-box domain signature 1. LWlrFkeltNEMIVTknGRR
ChainResidueDetails
ALEU51-ARG70

224201

PDB entries from 2024-08-28

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