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5QRN

PanDDA analysis group deposition -- Crystal Structure of human Brachyury in complex with Z54226006

Functional Information from GO Data
ChainGOidnamespacecontents
A0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
A0045893biological_processpositive regulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue CD A 301
ChainResidue
AGLU167
AGLU167
ACYS186
ACYS186
ACD302
ACD302
AHOH445
AHOH445

site_idAC2
Number of Residues6
Detailsbinding site for residue CD A 302
ChainResidue
ACYS186
ACD301
ACD301
AHOH455
AHOH460
AGLU167

site_idAC3
Number of Residues4
Detailsbinding site for residue CD A 303
ChainResidue
ACYS122
AHOH450
AHOH454
AHOH470

site_idAC4
Number of Residues4
Detailsbinding site for residue CD A 304
ChainResidue
AHIS100
AHOH458
AHOH459
AHOH463

site_idAC5
Number of Residues4
Detailsbinding site for residue CD A 305
ChainResidue
ACYS122
AHOH449
AHOH470
AHOH471

site_idAC6
Number of Residues4
Detailsbinding site for residue NX7 A 306
ChainResidue
ASER89
ALEU91
APHE132
AHOH459

Functional Information from PROSITE/UniProt
site_idPS01283
Number of Residues20
DetailsTBOX_1 T-box domain signature 1. LWlrFkeltNEMIVTknGRR
ChainResidueDetails
ALEU51-ARG70

site_idPS01264
Number of Residues19
DetailsTBOX_2 T-box domain signature 2. IHPDSpnfGahWMkapVsF
ChainResidueDetails
AILE125-PHE143

218196

PDB entries from 2024-04-10

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