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5QOO

PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with FMOPL000144a

Functional Information from GO Data
ChainGOidnamespacecontents
A0000184biological_processnuclear-transcribed mRNA catabolic process, nonsense-mediated decay
A0000290biological_processdeadenylation-dependent decapping of nuclear-transcribed mRNA
A0016787molecular_functionhydrolase activity
A0140933molecular_function5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue EDO A 301
ChainResidue
AALA142
AASP152
ALYS154
AHOH414
AHOH434

site_idAC2
Number of Residues2
Detailsbinding site for residue DMS A 302
ChainResidue
AASN111
ATRP199

site_idAC3
Number of Residues5
Detailsbinding site for residue ACT A 303
ChainResidue
AGLY179
AILE180
AHOH402
ASER122
ATYR156

site_idAC4
Number of Residues7
Detailsbinding site for residue PEG A 304
ChainResidue
AVAL115
AGLY117
ALYS121
AGLY123
ALYS128
AGLU148
AMET227

site_idAC5
Number of Residues9
Detailsbinding site for residue LDJ A 305
ChainResidue
ASER122
AASP155
ATYR156
AARG209
APRO222
AASN223
ALYS224
APHE226
AHOH478

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GkvnkeEaphdCAaREVfEEtG
ChainResidueDetails
AGLY129-GLY150

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues21
DetailsMotif: {"description":"Nudix box"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

248636

PDB entries from 2026-02-04

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