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5QH3

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with NUOOA000191

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0009132biological_processnucleoside diphosphate metabolic process
A0010945molecular_functioncoenzyme A diphosphatase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0030145molecular_functionmanganese ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ACT A 301
ChainResidue
AGLY70
ATYR187
AGLN188
AHOH451

site_idAC2
Number of Residues3
Detailsbinding site for residue ACT A 302
ChainResidue
AHYP102
AHIS103
AVAL105

site_idAC3
Number of Residues6
Detailsbinding site for residue DMS A 303
ChainResidue
AASN132
APHE133
AGLN134
AGLN136
AGLY99
AGLN104

site_idAC4
Number of Residues4
Detailsbinding site for residue DMS A 304
ChainResidue
AASP130
AHIS131
AASP144
AHOH418

site_idAC5
Number of Residues15
Detailsbinding site for residue H4G A 305
ChainResidue
ATYR41
AVAL43
ATHR59
AARG61
AARG67
ACYS73
APHE74
AGLY76
AGLY77
AGLU97
AILE122
AGLU141
AVAL142
AMET192
AHOH538

site_idAC6
Number of Residues10
Detailsbinding site for residue H4G A 306
ChainResidue
AALA49
ALYS50
AHIS131
AASN132
AALA135
ALEU147
AASN180
AGLU182
AHOH452
AHOH487

Functional Information from PROSITE/UniProt
site_idPS01293
Number of Residues21
DetailsNUDIX_COA Nudix CoA signature. LFTvRSeklRrapGevcFPGG
ChainResidueDetails
ALEU57-GLY77

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AGLU93
AGLU97

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Important for coenzyme A binding => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AARG67

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
ALYS21

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PDB entries from 2024-05-01

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