Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QGY

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with NUOOA000158

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0009132biological_processnucleoside diphosphate metabolic process
A0010945molecular_functioncoenzyme A diphosphatase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0030145molecular_functionmanganese ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ACT A 301
ChainResidue
AGLY70
ATYR187
AGLN188
AHOH448

site_idAC2
Number of Residues3
Detailsbinding site for residue ACT A 302
ChainResidue
AHYP102
AHIS103
AVAL105

site_idAC3
Number of Residues5
Detailsbinding site for residue DMS A 303
ChainResidue
APHE133
AGLN134
AGLN136
AGLY99
AGLN104

site_idAC4
Number of Residues5
Detailsbinding site for residue DMS A 304
ChainResidue
AASP130
AHIS131
AASP144
ATYR187
AHOH432

site_idAC5
Number of Residues10
Detailsbinding site for residue H1Y A 305
ChainResidue
ATYR41
AVAL43
ATHR59
AARG61
APHE74
AGLY76
AGLU97
AILE122
AGLU141
AVAL142

Functional Information from PROSITE/UniProt
site_idPS01293
Number of Residues21
DetailsNUDIX_COA Nudix CoA signature. LFTvRSeklRrapGevcFPGG
ChainResidueDetails
ALEU57-GLY77

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AGLU93
AGLU97

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Important for coenzyme A binding => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AARG67

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
ALYS21

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon