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5QGG

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with FMOPL000693a

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0009132biological_processnucleoside diphosphate metabolic process
A0010945molecular_functioncoenzyme A diphosphatase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0030145molecular_functionmanganese ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ACT A 301
ChainResidue
AGLY70
AVAL72
ATYR187
AGLN188
AHOH489

site_idAC2
Number of Residues4
Detailsbinding site for residue ACT A 302
ChainResidue
AHYP102
AHIS103
AVAL105
AHOH499

site_idAC3
Number of Residues6
Detailsbinding site for residue DMS A 303
ChainResidue
AGLY99
AARG101
AGLN104
APHE133
AGLN134
AGLN136

site_idAC4
Number of Residues3
Detailsbinding site for residue DMS A 304
ChainResidue
AASP130
AHIS131
AASP144

site_idAC5
Number of Residues7
Detailsbinding site for residue H2G A 305
ChainResidue
ACYS73
APHE74
AGLY76
AGLY77
AMET192
ATHR193
AHOH529

Functional Information from PROSITE/UniProt
site_idPS01293
Number of Residues21
DetailsNUDIX_COA Nudix CoA signature. LFTvRSeklRrapGevcFPGG
ChainResidueDetails
ALEU57-GLY77

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AGLU93
AGLU97

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Important for coenzyme A binding => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
AARG67

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99P30
ChainResidueDetails
ALYS21

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PDB entries from 2024-05-01

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