Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QAA

OXA-48 IN COMPLEX WITH COMPOUND 6a

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
B0005886cellular_componentplasma membrane
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
C0005886cellular_componentplasma membrane
C0008658molecular_functionpenicillin binding
C0008800molecular_functionbeta-lactamase activity
C0016787molecular_functionhydrolase activity
C0017001biological_processantibiotic catabolic process
C0046677biological_processresponse to antibiotic
C0071555biological_processcell wall organization
D0005886cellular_componentplasma membrane
D0008658molecular_functionpenicillin binding
D0008800molecular_functionbeta-lactamase activity
D0016787molecular_functionhydrolase activity
D0017001biological_processantibiotic catabolic process
D0046677biological_processresponse to antibiotic
D0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue EAJ A 301
ChainResidue
AILE102
ATHR209
ATYR211
AARG250
AHOH401
AHOH404
AHOH436
AHOH661
AHOH676

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 302
ChainResidue
AARG206
AHOH642
CARG206
CHOH620

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO A 303
ChainResidue
AARG100
AHOH406
AHOH498
AHOH566
AHOH581

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 304
ChainResidue
ASER40
AASP240
AMET241
APRO242
AHOH421
AHOH488

site_idAC5
Number of Residues4
Detailsbinding site for residue EAJ B 301
ChainResidue
BTHR209
BTYR211
BARG250
BHOH427

site_idAC6
Number of Residues2
Detailsbinding site for residue CL B 302
ChainResidue
BARG206
BHOH644

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO B 303
ChainResidue
BSER184
BARG186
BSER187
BHOH470

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO B 304
ChainResidue
BTHR167
BILE170
BSER171
BARG174
BHOH403

site_idAC9
Number of Residues7
Detailsbinding site for residue EDO B 305
ChainResidue
BLYS39
BSER40
BASP240
BMET241
BPRO242
BHOH422
BHOH570

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO B 306
ChainResidue
BALA65
BPHE66
BPRO217
BHOH413
BHOH495
BHOH513

site_idAD2
Number of Residues10
Detailsbinding site for residue EAJ C 301
ChainResidue
CILE102
CTYR211
CLEU247
CARG250
CHOH406
CHOH407
CHOH451
CHOH509
CHOH511
CHOH668

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO C 302
ChainResidue
CILE170
CSER171
CARG174
CHOH542

site_idAD4
Number of Residues7
Detailsbinding site for residue EDO C 303
ChainResidue
AHIS90
AHOH469
CTYR177
CGLU227
CVAL232
CHOH418
CHOH456

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO C 304
ChainResidue
AASN110
AHOH403
CASP229
CASP230

site_idAD6
Number of Residues2
Detailsbinding site for residue EDO C 305
ChainResidue
CARG100
CASP101

site_idAD7
Number of Residues8
Detailsbinding site for residue EAJ D 301
ChainResidue
DILE102
DTHR209
DTYR211
DARG250
DHOH401
DHOH483
DHOH515
DHOH631

site_idAD8
Number of Residues5
Detailsbinding site for residue EDO D 302
ChainResidue
DTYR177
DGLU227
DVAL232
DHOH443
DHOH502

site_idAD9
Number of Residues4
Detailsbinding site for residue EDO D 303
ChainResidue
DASP229
DASP230
DHOH413
DHOH416

site_idAE1
Number of Residues2
Detailsbinding site for residue EDO D 304
ChainResidue
DASN110
DHOH611

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO D 305
ChainResidue
DTHR167
DILE170
DSER171
DHOH455
DTRP47

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26731698","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31358584","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32150407","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P97","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P98","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P99","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P9C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6V1O","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q8RLA6","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P13661","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"19477418","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3HBR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon