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5QA6

OXA-48 IN COMPLEX WITH COMPOUND 4a

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
B0005886cellular_componentplasma membrane
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
C0005886cellular_componentplasma membrane
C0008658molecular_functionpenicillin binding
C0008800molecular_functionbeta-lactamase activity
C0016787molecular_functionhydrolase activity
C0017001biological_processantibiotic catabolic process
C0046677biological_processresponse to antibiotic
C0071555biological_processcell wall organization
D0005886cellular_componentplasma membrane
D0008658molecular_functionpenicillin binding
D0008800molecular_functionbeta-lactamase activity
D0016787molecular_functionhydrolase activity
D0017001biological_processantibiotic catabolic process
D0046677biological_processresponse to antibiotic
D0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue AUV A 301
ChainResidue
AARG250
AHOH409
AHOH503
AHOH504
AHOH569
AHOH601

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 302
ChainResidue
CHOH621
AARG206
AHOH664
CARG206

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO A 303
ChainResidue
AHIS90
AHOH426
AHOH442
CTYR177
CGLU227
CVAL232
CHOH530

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 304
ChainResidue
AGLN124
AASP154
AHOH498
BASN152
BASP159

site_idAC5
Number of Residues4
Detailsbinding site for residue AUV B 301
ChainResidue
BTYR117
BARG250
BHOH402
BHOH403

site_idAC6
Number of Residues2
Detailsbinding site for residue CL B 302
ChainResidue
BARG206
BHOH640

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO B 303
ChainResidue
BLEU81
BSER184
BARG186
BSER187
BHOH477
BHOH504

site_idAC8
Number of Residues3
Detailsbinding site for residue EDO B 304
ChainResidue
BLYS116
BHOH420
BHOH515

site_idAC9
Number of Residues5
Detailsbinding site for residue EDO B 305
ChainResidue
BTRP25
BSER171
BARG174
BHOH432
BHOH442

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 306
ChainResidue
BLYS94
BTRP95
BASP96
BVAL122
BHOH465

site_idAD2
Number of Residues8
Detailsbinding site for residue AUV C 301
ChainResidue
CILE102
CTYR117
CTHR209
CTYR211
CARG250
CHOH401
CHOH421
CHOH428

site_idAD3
Number of Residues5
Detailsbinding site for residue EDO C 302
ChainResidue
CVAL85
CGLN91
CPHE93
CGLN129
CHOH467

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO C 303
ChainResidue
CTHR167
CSER171
CARG174

site_idAD5
Number of Residues2
Detailsbinding site for residue EDO C 304
ChainResidue
CARG100
CASP101

site_idAD6
Number of Residues8
Detailsbinding site for residue AUV D 301
ChainResidue
DILE102
DTYR117
DTHR209
DTYR211
DARG250
DHOH426
DHOH563
DHOH610

site_idAD7
Number of Residues3
Detailsbinding site for residue EDO D 302
ChainResidue
DTYR177
DGLU227
DHOH506

site_idAD8
Number of Residues6
Detailsbinding site for residue EDO D 303
ChainResidue
DLEU81
DSER184
DARG186
DSER187
DHOH484
DHOH592

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26731698","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31358584","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32150407","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P97","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P98","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P99","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P9C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6V1O","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q8RLA6","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P13661","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"19477418","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3HBR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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