Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5PAR

Crystal Structure of Factor VIIa in complex with 1H-benzimidazol-2-amine

Functional Information from GO Data
ChainGOidnamespacecontents
C0004252molecular_functionserine-type endopeptidase activity
C0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue AX7 A 301
ChainResidue
APRO189
ATHR190
AVAL191
AGLU192
AAX7302

site_idAC2
Number of Residues5
Detailsbinding site for residue AX7 A 302
ChainResidue
CPRO457
ATHR190
AAX7301
CPRO455
CARG456

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 303
ChainResidue
ALYS197
AILE198
ALEU201
AGLU202
CTRP416

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL A 304
ChainResidue
AARG173
ACYS174
ASER179
ALEU180
AHOH405
AHOH407

site_idAC5
Number of Residues6
Detailsbinding site for residue CA C 501
ChainResidue
CGLU270
CASP272
CGLU275
CGLU280
CHOH631
CHOH714

site_idAC6
Number of Residues1
Detailsbinding site for residue CL C 502
ChainResidue
CGLU454

site_idAC7
Number of Residues1
Detailsbinding site for residue CL C 503
ChainResidue
CARG262

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 C 504
ChainResidue
CMET366
CTHR367
CARG439
CHOH625
CHOH713

site_idAC9
Number of Residues7
Detailsbinding site for residue SO4 C 505
ChainResidue
CLEU237
CHIS253
CLYS401
CGLY402
CSER404
CAX7506
CHOH660

site_idAD1
Number of Residues10
Detailsbinding site for residue AX7 C 506
ChainResidue
CASP398
CSER399
CLYS401
CSER404
CTRP424
CGLY425
CGLY427
CGLY435
CSO4505
CHOH652

site_idAD2
Number of Residues5
Detailsbinding site for residue AX7 C 507
ChainResidue
CPHE255
CASP256
CTRP261
CARG462
CHOH628

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
CVAL249-CYS254

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPHA
ChainResidueDetails
CASP398-ALA409

site_idPS01186
Number of Residues16
DetailsEGF_2 EGF-like domain signature 2. CrCheGYslladgvsC
ChainResidueDetails
ACYS172-CYS187

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system => ECO:0000250
ChainResidueDetails
CHIS253
CASP302
CSER404

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
CASP398

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19167329, ECO:0000269|PubMed:3264725
ChainResidueDetails
CASN382

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon