Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5PAG

Crystal Structure of Factor VIIa in complex with (2R)-2-hydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]-3-methylbutanamide;hydrobromide

Functional Information from GO Data
ChainGOidnamespacecontents
B0004252molecular_functionserine-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue GOL A 301
ChainResidue
ALYS197
AILE198
ALEU201
AGLU202
BTRP416

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 302
ChainResidue
AHOH403
AHOH414
AARG173
ACYS174
ASER179
ALEU180

site_idAC3
Number of Residues11
Detailsbinding site for residue 7YJ B 501
ChainResidue
BHIS253
BCYS254
BLYS257
BSER399
BCYS400
BLYS401
BSER404
BSER423
BTRP424
BHOH607
BHOH623

site_idAC4
Number of Residues6
Detailsbinding site for residue CA B 502
ChainResidue
BGLU270
BASP272
BGLU275
BGLU280
BHOH640
BHOH770

site_idAC5
Number of Residues1
Detailsbinding site for residue CL B 503
ChainResidue
BGLU454

site_idAC6
Number of Residues1
Detailsbinding site for residue CL B 504
ChainResidue
BARG262

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 B 505
ChainResidue
BMET366
BTHR367
BARG439
BHOH620
BHOH742

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
BVAL249-CYS254

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPHA
ChainResidueDetails
BASP398-ALA409

site_idPS01186
Number of Residues16
DetailsEGF_2 EGF-like domain signature 2. CrCheGYslladgvsC
ChainResidueDetails
ACYS172-CYS187

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"19167329","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"3264725","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsActive site: {"description":"Charge relay system","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon