5OYN
Crystal structure of D-xylonate dehydratase in holo-form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0016836 | molecular_function | hydro-lyase activity |
| A | 0042843 | biological_process | D-xylose catabolic process |
| A | 0047929 | molecular_function | gluconate dehydratase activity |
| A | 0050401 | molecular_function | xylonate dehydratase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0016836 | molecular_function | hydro-lyase activity |
| B | 0042843 | biological_process | D-xylose catabolic process |
| B | 0047929 | molecular_function | gluconate dehydratase activity |
| B | 0050401 | molecular_function | xylonate dehydratase activity |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0016836 | molecular_function | hydro-lyase activity |
| C | 0042843 | biological_process | D-xylose catabolic process |
| C | 0047929 | molecular_function | gluconate dehydratase activity |
| C | 0050401 | molecular_function | xylonate dehydratase activity |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0016836 | molecular_function | hydro-lyase activity |
| D | 0042843 | biological_process | D-xylose catabolic process |
| D | 0047929 | molecular_function | gluconate dehydratase activity |
| D | 0050401 | molecular_function | xylonate dehydratase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 601 |
| Chain | Residue |
| A | GLU92 |
| A | ASP129 |
| A | KCX130 |
| A | GLU463 |
| A | HOH718 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue FES A 602 |
| Chain | Residue |
| B | ARG30 |
| A | CYS60 |
| A | ASN93 |
| A | CYS128 |
| A | CYS201 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue MG B 601 |
| Chain | Residue |
| B | GLU92 |
| B | ASP129 |
| B | KCX130 |
| B | THR206 |
| B | GLU463 |
| B | HOH714 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue FES B 602 |
| Chain | Residue |
| A | ARG30 |
| B | CYS60 |
| B | ASN93 |
| B | CYS128 |
| B | ASP129 |
| B | HIS200 |
| B | CYS201 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue MG C 601 |
| Chain | Residue |
| C | GLU92 |
| C | ASP129 |
| C | KCX130 |
| C | GLU463 |
| C | HOH726 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue FES C 602 |
| Chain | Residue |
| C | CYS60 |
| C | CYS128 |
| C | ASP129 |
| C | HIS200 |
| C | CYS201 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue MG D 601 |
| Chain | Residue |
| D | GLU92 |
| D | ASP129 |
| D | KCX130 |
| D | GLU463 |
| D | HOH711 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | binding site for residue FES D 602 |
| Chain | Residue |
| C | ARG30 |
| D | CYS60 |
| D | ASN93 |
| D | CYS128 |
| D | ASP129 |
| D | CYS201 |
| D | HOH764 |
Functional Information from PROSITE/UniProt
| site_id | PS00886 |
| Number of Residues | 11 |
| Details | ILVD_EDD_1 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. CDKttPAgimA |
| Chain | Residue | Details |
| A | CYS128-ALA138 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"29339766","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
