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5OTN

Crystal structure of zebrafish MTH1 in complex with O6-methyl-dGMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005829cellular_componentcytosol
A0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
A0009151biological_processpurine deoxyribonucleotide metabolic process
A0016787molecular_functionhydrolase activity
A0016791molecular_functionphosphatase activity
A0016818molecular_functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
A0042262biological_processDNA protection
A0046872molecular_functionmetal ion binding
A0047429molecular_functionnucleoside triphosphate diphosphatase activity
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue 6OG A 201
ChainResidue
ATHR8
AGLU100
ATRP117
AASP119
AASP120
AGOL202
AGOL205
ACA211
AHOH344
AHOH387
AHOH428
ALEU9
ALYS23
AASN33
AGLY36
AGLY37
ALYS38
APHE72
AMET81

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 202
ChainResidue
ALYS5
ALYS38
ALEU54
A6OG201
AHOH357
AHOH376

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 203
ChainResidue
AVAL39
ATHR41
ALEU122
ALEU126
ALEU150
AGOL204
AHOH352
AHOH360

site_idAC4
Number of Residues10
Detailsbinding site for residue GOL A 204
ChainResidue
ASER4
AGLU79
APRO125
ALEU126
AGLN129
ALYS131
AGOL203
AHOH352
AHOH353
AHOH389

site_idAC5
Number of Residues12
Detailsbinding site for residue GOL A 205
ChainResidue
ALYS23
AARG25
AGLY26
APHE27
AVAL61
AASP62
AGLU92
AGLU100
A6OG201
ACA213
ACL217
AHOH428

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL A 206
ChainResidue
APHE2
AGLN14
AGLY16
ALEU128
ALYS130

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL A 207
ChainResidue
AGLN14
AGLN40
AARG51
AASN90
ATYR91
AHOH307
AHOH309
AHOH410

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL A 208
ChainResidue
ATHR44
AILE45
AALA118
AILE121
AHOH361
AHOH377
AHOH416

site_idAC9
Number of Residues4
Detailsbinding site for residue GOL A 209
ChainResidue
ASER114
AASP155
ALEU156
AHOH340

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL A 210
ChainResidue
APRO95
APRO103
AGLU152
AHOH398
AHOH403
AHOH413

site_idAD2
Number of Residues6
Detailsbinding site for residue CA A 211
ChainResidue
AGLY36
AGLU56
AGLU100
A6OG201
AHOH426
AHOH428

site_idAD3
Number of Residues6
Detailsbinding site for residue CA A 212
ChainResidue
AGLU52
AGLU55
AASP62
AGLU92
AHOH331
AHOH397

site_idAD4
Number of Residues6
Detailsbinding site for residue CA A 213
ChainResidue
AGLU100
AGOL205
AHOH331
AHOH428
AASP62
AGLU92

site_idAD5
Number of Residues3
Detailsbinding site for residue EDO A 214
ChainResidue
ALEU128
AGLN129
AHOH355

site_idAD6
Number of Residues7
Detailsbinding site for residue EDO A 215
ChainResidue
ALYS66
AASN69
ASER114
ALEU134
ALEU156
AEDO216
AHOH439

site_idAD7
Number of Residues6
Detailsbinding site for residue EDO A 216
ChainResidue
APRO112
APHE113
ASER114
AGLN115
AEDO215
AHOH439

site_idAD8
Number of Residues4
Detailsbinding site for residue CL A 217
ChainResidue
AGLY26
AARG50
AGOL205
AHOH444

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GkvqtgEtieqAArRELlEEsG
ChainResidueDetails
AGLY37-GLY58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:30304478, ECO:0007744|PDB:5OTN
ChainResidueDetails
ATHR8
ATRP117
ALYS23
AASN33
APHE35
AGLY36
AGLU52
AGLU55
AGLU56
AGLU100

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PDB entries from 2025-06-11

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