5OTC
Structure of the periplasmic binding protein (PBP) NocT from Agrobacterium tumefaciens C58 in complex with noroctopinic acid.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| A | 0016020 | cellular_component | membrane |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0034220 | biological_process | monoatomic ion transmembrane transport |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0071705 | biological_process | nitrogen compound transport |
| B | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| B | 0016020 | cellular_component | membrane |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0034220 | biological_process | monoatomic ion transmembrane transport |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0071705 | biological_process | nitrogen compound transport |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 12 |
| Details | binding site for residue AQK A 301 |
| Chain | Residue |
| A | GLU36 |
| A | SER169 |
| A | HIS170 |
| A | SER207 |
| A | TYR39 |
| A | TYR42 |
| A | TRP77 |
| A | ALA95 |
| A | GLY97 |
| A | ARG102 |
| A | GLN165 |
| A | THR168 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 302 |
| Chain | Residue |
| A | GLU246 |
| A | ASP247 |
| A | ALA248 |
| A | ASP249 |
| A | HOH423 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 303 |
| Chain | Residue |
| A | LYS104 |
| A | GLU145 |
| A | SER184 |
| A | THR185 |
| A | LYS245 |
| A | HOH408 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 304 |
| Chain | Residue |
| A | ASP151 |
| A | LYS155 |
| A | GLU158 |
| A | HOH416 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 305 |
| Chain | Residue |
| A | ASP264 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue EDO A 306 |
| Chain | Residue |
| A | ARG229 |
| A | TYR277 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 307 |
| Chain | Residue |
| A | ASP190 |
| A | VAL193 |
| A | PHE210 |
| A | LEU214 |
| A | CL317 |
| A | HOH443 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 308 |
| Chain | Residue |
| A | SER125 |
| A | LYS129 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue CL A 309 |
| Chain | Residue |
| A | VAL164 |
| A | GLN165 |
| A | HIS170 |
| A | ILE189 |
| A | LEU205 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 310 |
| Chain | Residue |
| A | THR118 |
| A | GLY227 |
| A | ARG229 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 312 |
| Chain | Residue |
| A | TYR186 |
| A | ASP187 |
| A | ASN191 |
| site_id | AD3 |
| Number of Residues | 6 |
| Details | binding site for residue CL A 313 |
| Chain | Residue |
| A | MET93 |
| A | ALA94 |
| A | ALA95 |
| A | MET96 |
| A | TYR112 |
| A | GLY240 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 315 |
| Chain | Residue |
| A | THR122 |
| A | ASP202 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 316 |
| Chain | Residue |
| A | GLU103 |
| A | SER180 |
| A | LYS237 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 317 |
| Chain | Residue |
| A | ALA40 |
| A | ASP190 |
| A | EDO307 |
| site_id | AD7 |
| Number of Residues | 3 |
| Details | binding site for residue PEG A 318 |
| Chain | Residue |
| A | THR168 |
| A | ALA172 |
| A | GLN176 |
| site_id | AD8 |
| Number of Residues | 5 |
| Details | binding site for residue PGE A 319 |
| Chain | Residue |
| A | ALA86 |
| A | GLY87 |
| A | PRO126 |
| A | THR130 |
| A | ARG244 |
| site_id | AD9 |
| Number of Residues | 12 |
| Details | binding site for residue AQK B 301 |
| Chain | Residue |
| B | GLU36 |
| B | TYR39 |
| B | TRP77 |
| B | ALA95 |
| B | GLY97 |
| B | ARG102 |
| B | MET117 |
| B | GLN165 |
| B | THR168 |
| B | SER169 |
| B | HIS170 |
| B | SER207 |
| site_id | AE1 |
| Number of Residues | 1 |
| Details | binding site for residue CL B 302 |
| Chain | Residue |
| B | ASP140 |
Functional Information from PROSITE/UniProt
| site_id | PS01039 |
| Number of Residues | 14 |
| Details | SBP_BACTERIAL_3 Bacterial extracellular solute-binding proteins, family 3 signature. GFDIDLGNdLCKRM |
| Chain | Residue | Details |
| A | GLY53-MET66 |
