5OTA
Structure of the periplasmic binding protein (PBP) NocT from Agrobacterium tumefaciens C58 in complex with octopinic acid
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| A | 0016020 | cellular_component | membrane |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0034220 | biological_process | monoatomic ion transmembrane transport |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0071705 | biological_process | nitrogen compound transport |
| B | 0015276 | molecular_function | ligand-gated monoatomic ion channel activity |
| B | 0016020 | cellular_component | membrane |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0034220 | biological_process | monoatomic ion transmembrane transport |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0071705 | biological_process | nitrogen compound transport |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | binding site for residue AQQ A 301 |
| Chain | Residue |
| A | GLU36 |
| A | SER169 |
| A | HIS170 |
| A | SER207 |
| A | PHE210 |
| A | HOH462 |
| A | TYR39 |
| A | TRP77 |
| A | ALA95 |
| A | GLY97 |
| A | ARG102 |
| A | MET117 |
| A | GLN165 |
| A | THR168 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 302 |
| Chain | Residue |
| A | ALA86 |
| A | GLY87 |
| A | ARG244 |
| A | HOH457 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 303 |
| Chain | Residue |
| A | ALA101 |
| A | LYS104 |
| A | PRO144 |
| A | GLU145 |
| A | HOH470 |
| site_id | AC4 |
| Number of Residues | 14 |
| Details | binding site for residue AQQ B 301 |
| Chain | Residue |
| B | GLU36 |
| B | TYR39 |
| B | TRP77 |
| B | ALA95 |
| B | GLY97 |
| B | ARG102 |
| B | MET117 |
| B | GLN165 |
| B | THR168 |
| B | SER169 |
| B | HIS170 |
| B | SER207 |
| B | PHE210 |
| B | HOH416 |
Functional Information from PROSITE/UniProt
| site_id | PS01039 |
| Number of Residues | 14 |
| Details | SBP_BACTERIAL_3 Bacterial extracellular solute-binding proteins, family 3 signature. GFDIDLGNdLCKRM |
| Chain | Residue | Details |
| A | GLY53-MET66 |
