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5OMY

HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000785cellular_componentchromatin
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0005956cellular_componentprotein kinase CK2 complex
A0006302biological_processdouble-strand break repair
A0006457biological_processprotein folding
A0006468biological_processprotein phosphorylation
A0006915biological_processapoptotic process
A0006974biological_processDNA damage response
A0007165biological_processsignal transduction
A0008284biological_processpositive regulation of cell population proliferation
A0016055biological_processWnt signaling pathway
A0016301molecular_functionkinase activity
A0016605cellular_componentPML body
A0016740molecular_functiontransferase activity
A0017148biological_processnegative regulation of translation
A0018105biological_processpeptidyl-serine phosphorylation
A0030177biological_processpositive regulation of Wnt signaling pathway
A0030307biological_processpositive regulation of cell growth
A0031507biological_processheterochromatin formation
A0031519cellular_componentPcG protein complex
A0032435biological_processnegative regulation of proteasomal ubiquitin-dependent protein catabolic process
A0035102cellular_componentPRC1 complex
A0042176biological_processregulation of protein catabolic process
A0042802molecular_functionidentical protein binding
A0045732biological_processpositive regulation of protein catabolic process
A0045893biological_processpositive regulation of DNA-templated transcription
A0048511biological_processrhythmic process
A0050821biological_processprotein stabilization
A0051726biological_processregulation of cell cycle
A0051879molecular_functionHsp90 protein binding
A0070822cellular_componentSin3-type complex
A0075342biological_processsymbiont-mediated disruption of host cell PML body
A0106310molecular_functionprotein serine kinase activity
A1901797biological_processnegative regulation of signal transduction by p53 class mediator
A1905337biological_processpositive regulation of aggrephagy
A1905818biological_processregulation of chromosome separation
A2000042biological_processnegative regulation of double-strand break repair via homologous recombination
A2001234biological_processnegative regulation of apoptotic signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue 9YE A 401
ChainResidue
ALEU45
AHIS160
AMET163
AILE174
AASP175
AHOH505
AGLY46
AGLY48
ASER51
AVAL66
ALYS68
AILE95
AASN118
AASP120

site_idAC2
Number of Residues2
Detailsbinding site for residue CL A 402
ChainResidue
AHIS148
AALA315

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 403
ChainResidue
AARG155
AASN189

site_idAC4
Number of Residues4
Detailsbinding site for residue CL A 404
ChainResidue
ALYS229
APHE232
AHIS234
AARG244

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 405
ChainResidue
ALYS122
APRO159
AHIS160

site_idAC6
Number of Residues2
Detailsbinding site for residue CL A 406
ChainResidue
AARG43
AGLU187

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues24
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGRGKYSEVFeAinitnnek..........VVVK
ChainResidueDetails
ALEU45-LYS68

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. ImHrDVKphNVMI
ChainResidueDetails
AILE152-ILE164

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues285
DetailsDomain: {"description":"Protein kinase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsRegion: {"description":"Interaction with beta subunit","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Proton acceptor"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues9
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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