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5OM5

Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo1: an allosterically triggered drug-binding serpin for doxycycline

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004867molecular_functionserine-type endopeptidase inhibitor activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0006953biological_processacute-phase response
A0006954biological_processinflammatory response
A0019216biological_processregulation of lipid metabolic process
A0030277biological_processmaintenance of gastrointestinal epithelium
A0031093cellular_componentplatelet alpha granule lumen
A0034774cellular_componentsecretory granule lumen
A0035578cellular_componentazurophil granule lumen
A0062023cellular_componentcollagen-containing extracellular matrix
A0070062cellular_componentextracellular exosome
A0072562cellular_componentblood microparticle
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue EDO A 501
ChainResidue
AASN30
APRO54
ALEU55
ASER58
AHOH623
BSER387
BILE388

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 502
ChainResidue
ASER95
APHE96
AHOH623
AASN30
APHE82

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 503
ChainResidue
ATHR203
AGLN205
AASP303
AHOH631

site_idAC4
Number of Residues4
Detailsbinding site for residue CL A 504
ChainResidue
AARG349
BMET378
BMET391
BSER392

Functional Information from PROSITE/UniProt
site_idPS00284
Number of Residues11
DetailsSERPIN Serpins signature. VRFNRPFLMiI
ChainResidueDetails
BVAL370-ILE380

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsDNA_BIND:
ChainResidueDetails
ALYS212-LYS214

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Reactive bond
ChainResidueDetails
AGLN360

site_idSWS_FT_FI3
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952
ChainResidueDetails
AASN10
AASN163

site_idSWS_FT_FI4
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:12754519, ECO:0000269|PubMed:14760718, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN70

site_idSWS_FT_FI5
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:12754519, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN83

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN104
AASN248

223166

PDB entries from 2024-07-31

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